|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | |
. | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  | . |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  | . |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | N | V | G | F | I | G | W | R | G | M | V | G | S | V | L | M | Q | R | M | . |
V | E | E | R | D | F | D | A | I | R | P | V | F | F | S | T | S | Q | L | G | Q | A | A | P | S | F | G | G | T | T | G | . |
T | L | Q | D | A | F | D | L | E | A | L | K | A | L | D | I | I | V | T | C | Q | G | G | D | Y | T | N |
Query Conservation |   |
  |   |
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|
|
|
| . |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |
| . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|
|   | . |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
| . | . |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |
|   |
|   |
|   |
|
|   |   |   |
|   |
Template Sequence |   |
L | R | A | A | I | I | G | L | . |
G | R | L | G | E | R | H | A | R | H | L | V | N | K | I | Q | G | V | K | L | V | A | A | . |
. |
C | A | L | D | S | N | Q | L | E | W | A | K | N | E | L | G | V | E | T | T | Y | T | N | Y | K | D | X | I | D | T | E | N | I | D | A | I | F | I | V | A | P | T | P | F | H | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |
|
| . | S | T | T |  |  |  |  |  |  |  |  |  |  | T |
| S | S |  |  |  |  |  |  | . | . |  |
| S |
|  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  | S |
|  |  |  |  |  | T | T | S |
|
| S |  |  |  |  |
| S |
| G | G | G |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  | . | . |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
8 | . | 10 | . | . | . | . | . | |
. | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | |
|
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | |
|
. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | I | Y | P | K | L | R | E | S | G | W | Q | G | Y | W | I | D | A | A | S | S | L | R | M | K | D | D | A | I | I | I | L | D | P | V | N | Q | D | V | I | T | D | G | L | N | N | G | I | R | . |
. |
T | F | V | G | G | N | C | T | V | S | L | M | L | M | S | L | G | G | L | F | A | N | D | L | V | D | W | V | S |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   | . | . |
|
|
|
|
|
|
|   |
|
|   |   |   |
|   |
|   |
|
|   |   |   |   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|
|   |   |
|   |   | . | . |
|   | . | . | . | . | . | . | . | . | . |   |
|
|
|   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |
|   |   |
|   |
|
|   |
|   |
Template Sequence |   |
E | X | T | I | Y | A | X | N | A | G | L | N | . |
. |
V | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
C | E | K | P | L | G | L | D | F | N | E | V | D | E | X | A | K | V | I | K | S | H | P | N | Q | I | F | Q | S | G | F | X | R | R | Y | D | D | S | Y | R | Y | A | K | K | I | V | D | N | G | D | I | G | K | I | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T |
|  | . | . |  |  | . | . | . | . | . | . | . | . | . |  |
| S |
|
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  | T |
| T | T | S |
|  |  |
|
|
| G | G | G | T |
|  |  |  |  |  |  |  |  |  |  |  | T | T | T | T |
| S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  | . | . |  |  | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | |
|
. | . | |
|
|
|
|
|
|
|
|
. | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . |
  |
  |   |
158 | . | 160 | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
V | A | T | Y | Q |
Query Conservation |   |
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
Template Sequence |   |
Y | X | R | G | Y |
Template Known Secondary structure |   |
 |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
  |   |
154 | . | . | . | . |
  |