Job Description P0A9Q9 Confidence 96.48% Date Thu Jan 5 11:11:02 GMT 2012 Rank 315 Aligned Residues 147 % Identity 12% Template c3btuD_ PDB info PDB header:transcription Chain: D: PDB Molecule:galactose/lactose metabolism regulatory protein PDBTitle: crystal structure of the super-repressor mutant of gal80p2 from saccharomyces cerevisiae; gal80(s2) [e351k] Resolution 2.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.				10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure										.	.	.															.																																.
Query SS confidence										.	.	.															.																																.
Query Sequence		K	N	V	G	F	I	G	W	.	.	.	R	G	M	V	G	S	V	L	M	Q	R	M	V	E	.	E	R	D	F	D	A	I	R	P	V	F	F	S	T	S	Q	L	G	Q	A	A	P	S	F	G	G	T	T	G	T	L	.	Q	D	A	F	D	L	E	A	L	K	A	L	D	I	I	V	T	C	Q	G	G	D
Query Conservation										.	.	.															.																																.
Alig confidence										.	.	.															.																																.
Template Conservation
Template Sequence		I	R	V	G	F	V	G	L	N	A	A	K	G	W	A	I	K	T	H	Y	P	A	I	L	Q	L	S	S	Q	F	Q	I	T	A	L	Y	S	P	K	I	E	T	S	I	A	T	I	Q	R	L	K	L	S	N	A	T	A	F	P	T	L	E	S	F	A	S	S	S	T	I	D	M	I	V	I	A	I	Q	V	A
Template Known Secondary structure								S			S	S	S	S	S	G	G	G	T								T	T	T	T									S	S											T	T		T	T					S	S								S	S		S						S		G	G
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90						.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																.	.	.	.	.
Query SS confidence																.	.	.	.	.
Query Sequence		Y	T	N	E	I	Y	P	K	L	R	E	S	G	W	.	.	.	.	.	Q	G	Y	W	I	D	A	A	S	S	L	R	M	K	D	D	A	I	I	I	L	D	P	V	N	Q	D	V	I	T	D	G	L	N	N	G	I	R	T	F	V	G	G	N	C	T	V	S	L	M	L	M	S	L	G	G	L	F	A	N	D
Query Conservation																.	.	.	.	.
Alig confidence																.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.
Template Sequence		S	H	Y	E	V	V	M	P	L	L	E	F	S	K	N	N	P	N	L	K	Y	L	F	V	E	W	A	L	A	C	S	L	D	Q	A	E	.	.	.	.	.	.	.	.	.	S	I	Y	K	A	A	A	E	R	G	V	Q	T	I	I	S	L	Q	G	R	K	S	P	Y	I	L	R	A	K	E	L	I	S	Q	G
Template Known Secondary structure		G												G	G	G		T	T								S	S			S	S						.	.	.	.	.	.	.	.	.										T								G	G	G	G													T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.										.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		152	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	D	W	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	I	G	D	I	N
Template Known Secondary structure		T	T		S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions