Job Description P0A9Q9 Confidence 100.00% Date Thu Jan 5 11:11:02 GMT 2012 Rank 43 Aligned Residues 239 % Identity 13% Template c2yyyB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase; PDBTitle: crystal structure of glyceraldehyde-3-phosphate2 dehydrogenase Resolution 1.85 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.																		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	N	V	G	F	I	G	W	R	G	M	V	G	S	V	L	M	Q	R	M	V	E	E	R	D	F	D	A	I	R	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	F	S	T	S	Q	L	G	Q	A	A	P	S	F	G	G	T	T	G	T	L	Q	D	A	F	D	L	E	A	L	K
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation									.																																																																						.
Template Sequence		A	K	V	L	I	N	G	.	Y	G	S	I	G	K	R	V	A	D	A	V	S	M	Q	D	D	M	E	V	I	G	V	T	K	T	K	P	D	F	E	A	R	L	A	V	E	K	G	Y	K	L	F	V	A	I	P	D	N	E	R	V	K	L	F	E	D	A	G	I	P	V	E	G	T	I	L	D	I	.	I	E
Template Known Secondary structure									.		S													S	S	S									S	S		S									T	T						S	S													T						B	G	G	G	T	.	G	G
Template Predicted Secondary structure									.																																																																						.
Template SS confidence
		3	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	D	I	I	V	T	C	Q	G	G	D	Y	T	N	E	I	Y	P	K	L	R	E	S	G	W	Q	G	Y	W	I	D	A	A	S	S	L	R	M	K	D	D	A	I	I	I	L	D	P	V	N	Q	D	V	I	T	D	G	L	N	N	G	I	R	T	F	V	G	G	N	C	T	V	S	L	M	L	M	S	L
Query Conservation
Alig confidence																													.	.																											.	.	.	.	.
Template Conservation																													.	.																											.	.	.	.	.
Template Sequence		D	A	D	I	V	V	D	G	A	P	K	K	I	G	K	Q	N	L	E	N	I	Y	K	P	H	K	V	.	.	K	A	I	L	Q	G	G	E	K	A	K	D	V	E	D	N	F	N	A	L	W	S	Y	N	R	C	.	.	.	.	.	Y	G	K	D	Y	V	R	V	V	S	C	N	T	T	G	L	C	R	I	L
Template Known Secondary structure		G		S								T	T									T	T	T	T	T	T		.	.						T	T	S		G	G	G	S	S					T	T	T	T	T	T	T	T	.	.	.	.	.	T	T		S
Template Predicted Secondary structure																													.	.																											.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.						.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	L	F	A	N	D	L	V	D	W	V	S	V	A	T	Y	Q	A	A	S	G	G	G	A	R	H	M	R	E	L	L	T	Q	M	G	H	L	Y	G	H	V	A	D	E	L	A	T	P	S	S	A	I	L	D	I	E	R	K	V	T	T	L	T	R	S	G	E	L	P	V	D	N	F	G	V	P	L	A	G
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	A	I	N	S	I	A	D	I	K	K	A	R	I	V	L	V	R	R	A	A	D	P	N	D	D	K	T	G	P	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	T	P	N	P	V	T	V	P	S	H	H	G	P	D	V	V
Template Known Secondary structure						T	T	S													S	S		T	T		S	S				S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S	S	S	S	S		T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.																															.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	I	P	W	I	D	K	Q	L	D	N	G	Q	S	R	E	E	W	K	G	Q	A	E	T	N	K	I	L	N	T	S	S	V	I	P	V	D	G	L	C	V	R	V	G	A	L	R	C	H	S	Q	A	F	T	I	K	L	K	K	D	V	S	I	P	T	V	E	E	L	L	A	A	H	N	P	W	A	K	V
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.
Template Sequence		S	V	V	P	E	F	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	L	T	S	A	V	I	V	P	T	T	L	M	H	M	H	T	L	M	V	E	V	D	G	D	V	S	R	D	D	I	L	E	A	I	K	K	T	.	.	.	P	R	I
Template Known Secondary structure					G	G	G	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S									S			S												S														S	.	.	.	T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.
Template SS confidence
		204	.	.	.	.	.	210	.																												.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250				.	.	.
		305	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	N	D	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	T	V	R	A
Template Known Secondary structure						G
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions