Job Description P0A9Q9 Confidence 100.00% Date Thu Jan 5 11:11:02 GMT 2012 Rank 11 Aligned Residues 302 % Identity 15% Template c2q49B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:probable n-acetyl-gamma-glutamyl-phosphate reductase; PDBTitle: ensemble refinement of the protein crystal structure of gene product2 from arabidopsis thaliana at2g19940 Resolution 2.19 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.						.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.
Query SS confidence																																															.	.	.	.	.
Query Sequence		K	N	V	G	F	I	G	W	R	G	M	V	G	S	V	L	M	Q	R	M	V	E	E	R	D	F	D	A	I	R	P	V	F	F	S	T	S	Q	L	G	Q	A	A	P	S	.	.	.	.	.	F	G	G	T	T	G	T	L	Q	D	A	F	D	L	E	A	L	K	A	L	D	I	I	V	T	C	Q	G	G	D
Query Conservation																																															.	.	.	.	.
Alig confidence																												.	.	.																	.	.	.	.	.
Template Conservation																												.	.	.
Template Sequence		I	R	I	G	L	L	G	A	S	G	Y	T	G	A	E	I	V	R	L	L	A	N	H	P	H	F	.	.	.	Q	V	T	L	M	T	A	D	R	K	A	G	Q	S	M	E	S	V	F	P	H	L	R	A	Q	K	L	P	T	L	V	S	V	K	D	A	D	F	S	T	V	D	A	V	F	C	C	L	P	H	G
Template Known Secondary structure									T	T	S												T		S	S		.	.	.								G	G	G	T	T	S		G	G	G	T		G	G	G	T	T	S						B		T	T	T	S		T	T	S		S								T	T
Template Predicted Secondary structure																												.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.				.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.																				.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	T	N	E	I	Y	P	K	L	R	E	S	G	W	Q	G	Y	W	I	D	A	A	S	S	L	R	M	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	I	I	I	L	D	P	V	N	Q	D	V	I	T	D	G	L	N	N	G	I	R	T	F	V	G	G	N	C	T	V
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.						.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation											.						.	.																																														.	.	.	.	.
Template Sequence		T	T	Q	E	I	I	K	E	L	.	P	T	A	L	K	.	.	I	V	D	L	S	A	D	F	R	L	R	N	I	A	E	Y	E	E	W	Y	G	Q	P	H	K	A	V	E	L	Q	K	E	V	V	Y	G	L	T	E	I	L	R	E	D	I	.	.	.	.	.	K	K	A	R	L	V	A	N	P	G	C	Y	P
Template Known Secondary structure		S							T	S	.		S	S			.	.					S	S	T	T	T		S										S	S			S						T	T														.	.	.	.	.				S
Template Predicted Secondary structure											.						.	.																																														.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.		.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.						.	.	.	.	.	.	.	160	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		S	L	M	L	M	S	L	G	G	L	F	A	N	D	L	V	D	.	.	W	V	S	V	A	T	Y	Q	A	A	S	G	G	G	A	R	H	M	R	E	L	L	T	Q	M	G	H	L	Y	G	H	V	A	D	E	L	A	T	P	S	S	A	I	L	D	I	E	R	K	V	T	T	L	T	R	S	G	E	L	P	V
Query Conservation																			.	.
Alig confidence																			.	.																							.	.																																			.	.	.
Template Conservation																																											.	.																																			.	.	.
Template Sequence		T	T	I	Q	L	P	L	V	P	L	L	K	A	N	L	I	K	H	E	N	I	I	I	D	A	K	S	G	V	S	G	A	G	R	G	A	K	E	A	N	L	.	.	Y	S	E	I	A	E	G	I	S	S	Y	G	V	T	R	H	R	H	V	P	E	I	E	Q	G	L	S	D	V	A	Q	S	K	V	.	.	.
Template Known Secondary structure														T	T		B		S	S	S									G	G	G	G		S				G	G	G		.	.					T	T						S		S			T														T	S			.	.	.
Template Predicted Secondary structure																																											.	.																																			.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.			.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	F	G	V	P	L	A	G	S	L	I	P	W	I	D	K	Q	L	D	N	G	Q	S	R	E	E	W	K	G	Q	A	E	T	N	K	I	L	N	T	S	S	V	I	P	V	D	G	L	C	V	R	V	G	A	L	R	C	H	S	Q	A	F	T	I	K	L	K	K	D	V	S	I	P	T	V	E	E	L	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	S	F	T	P	H	L	M	P	M	I	R	G	M	Q	S	T	I	Y	V	E	M	A	P	G	V	R	T	E	D	L	H	Q	Q	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S	S	S	S										B		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																														241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	H	N	P	W	A	K	V	V	P	N	D	R	E	I	T	M	R	E	L	T	P	A	A	V	T	G	T	L	T	T	P	V	G	R	L	R	K	L	N	M	G	P	E	F	L	S	A	F	T	V	G	D	Q	L	L	W	G	A	A	E	P	L	R	R	M	L	R	Q	L	A
Query Conservation
Alig confidence														.	.																									.	.
Template Conservation														.	.																									.	.
Template Sequence		K	T	S	Y	E	D	E	E	F	V	K	V	.	.	L	D	E	G	V	V	P	R	T	H	N	V	R	G	S	N	Y	C	H	M	S	V	F	P	.	.	D	R	I	P	G	R	A	I	I	I	S	V	I	D	N	L	V	K	G	A	S	G	Q	A	L	Q	N	L	N	I	M	L
Template Known Secondary structure						S	S		S	S				.	.			T	T					G	G	G	G	S	S	S	S									.	.		S	S	T	T										T	T	T	T	T	T												T
Template Predicted Secondary structure														.	.																									.	.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.			.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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