Job Description P0A9Q9 Confidence 100.00% Date Thu Jan 5 11:11:02 GMT 2012 Rank 8 Aligned Residues 327 % Identity 20% Template c2hjsA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:usg-1 protein homolog; PDBTitle: the structure of a probable aspartate-semialdehyde dehydrogenase from2 pseudomonas aeruginosa Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	V	G	F	I	G	W	R	G	M	V	G	S	V	L	M	Q	R	M	V	E	E	R	D	F	D	A	I	R	P	V	F	F	S	T	S	Q	L	G	Q	A	A	P	S	F	G	G	T	T	G	T	L	Q	D	A	F	D	L	E	A	L	K	A	L	D	I	I	V	T	C	Q	G	G	D	Y	T	N	E	I
Query Conservation
Alig confidence																									.																																					.
Template Conservation																									.																																					.
Template Sequence		L	N	V	A	V	V	G	A	T	G	S	V	G	E	A	L	V	G	L	L	D	E	R	.	D	F	P	L	H	R	L	H	L	L	A	S	A	E	S	A	G	Q	R	X	G	F	A	E	S	S	L	R	V	G	D	V	D	S	F	D	.	F	S	S	V	G	L	A	F	F	A	A	A	A	E	V	S	R	A	H
Template Known Secondary structure								T	T	T	S													T	.	T				S								T	T	T	T	T						T	T								G	G	G			.	G	G	G		S						S
Template Predicted Secondary structure																									.																																					.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	K	L	R	E	S	G	W	Q	G	Y	W	I	D	A	A	S	S	L	R	M	K	D	D	A	I	I	I	L	D	P	V	N	Q	D	V	I	T	D	G	L	N	N	G	I	R	T	F	V	G	G	N	C	T	V	S	L	M	L	M	S	L	G	G	L	F	A	N	D	L	V	D	W	V	S	V	A	T	Y
Query Conservation
Alig confidence												.	.														.													.	.
Template Conservation												.	.														.													.	.
Template Sequence		A	E	R	A	R	A	A	G	C	S	.	.	V	I	D	L	S	G	A	L	E	P	S	V	A	.	P	P	V	X	V	S	V	N	A	E	R	L	.	.	A	S	Q	A	A	P	F	L	L	S	S	P	C	A	V	A	A	E	L	C	E	V	L	A	P	L	L	A	T	L	D	C	R	Q	L	N	L	T	A	C
Template Known Secondary structure								T	T			.	.				T	T		T	T	T	T	T	T	S	.		B							G	G	G	G	.	.	G	G	S		S	S																					T	T	T
Template Predicted Secondary structure												.	.														.													.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	A	S	G	G	G	A	R	H	M	R	E	L	L	T	Q	M	G	H	L	Y	G	H	V	A	D	E	L	A	T	P	S	S	A	I	L	D	I	E	R	K	V	T	T	L	T	R	S	G	E	L	P	V	D	N	F	G	V	P	L	A	G	S	L	I	P	W	I	D	K	Q	L	D	N	G	Q	S	R	E
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	V	S	S	L	G	R	E	G	V	K	E	L	A	R	Q	T	A	E	L	L	N	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	E	P	R	L	F	D	R	Q	I	A	F	N	L	L	A	Q	V	G	A	V	D	A	E	G	H	S	A	I
Template Known Secondary structure				G	G	G	G																	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S	S	S	S			T	T			B	S	S	S	S		B		T	T	S		B
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.																										.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	W	K	G	Q	A	E	T	N	K	I	L	N	T	S	S	V	I	P	V	D	G	L	C	V	R	V	G	A	L	R	C	H	S	Q	A	F	T	I	K	L	K	K	D	V	S	I	P	T	V	E	E	L	L	A	A	H	N	P	W	A	K	V	V	P	N	D	R	E	I	T	M	R	E	L	T	P	A	A	V
Query Conservation
Alig confidence																			.																																								.													.	.	.	.
Template Conservation																			.																																								.													.	.	.	.
Template Sequence		E	R	R	I	F	A	E	V	Q	A	L	L	G	E	R	I	G	.	P	L	N	V	T	C	I	Q	A	P	V	F	F	G	D	S	L	S	V	T	L	Q	C	A	E	P	V	D	L	A	A	V	T	R	V	L	D	A	T	.	K	G	I	E	W	V	G	E	G	D	Y	P	.	.	.	.	T	V	V	G	D	A
Template Known Secondary structure													T	G	G	G	B		.										S		S	S											S	S														S	.	T	T						T	T				.	.	.	.
Template Predicted Secondary structure																			.																																								.													.	.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280					.	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	T	L	T	T	P	V	G	R	L	R	K	L	N	M	G	P	E	F	L	S	A	F	T	V	G	D	Q	L	L	W	G	A	A	E	P	L	R	R	M	L	R	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	Q	D	E	T	Y	V	G	R	V	R	A	G	Q	A	D	P	C	Q	V	N	L	W	I	V	S	D	N	V	R	K	G	A	A	L	N	A	V	L	L	G	E	L	L
Template Known Secondary structure		T	T	S	S											S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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