Job Description P0A9Q9 Confidence 100.00% Date Thu Jan 5 11:11:02 GMT 2012 Rank 54 Aligned Residues 230 % Identity 18% Template c2czcD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase; PDBTitle: crystal structure of glyceraldehyde-3-phosphate dehydrogenase from2 pyrococcus horikoshii ot3 Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	N	V	G	F	I	G	W	R	G	M	V	G	S	V	L	M	Q	R	M	V	E	E	R	D	F	D	A	I	R	P	V	F	F	S	T	S	Q	L	G	Q	A	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	F	G	G	T	T	G	T	L	Q	D	A	F	D	L	E	A	L	K
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																								.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation									.																								.	.																																									.
Template Sequence		V	K	V	G	V	N	G	.	Y	G	T	I	G	K	R	V	A	Y	A	V	T	K	Q	D	D	M	E	L	I	G	I	.	.	T	K	T	K	P	D	F	E	A	Y	R	A	K	E	L	G	I	P	V	Y	A	A	S	E	E	F	I	P	R	F	E	K	E	G	F	E	V	A	G	T	.	L	N	D	L	L	E
Template Known Secondary structure									.		S												T		S	S							.	.			S	S											T	T						S	S	G	G	G							T	T				S		B	.						T
Template Predicted Secondary structure									.																								.	.																																									.
Template SS confidence
		3	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	D	I	I	V	T	C	Q	G	G	D	Y	T	N	E	I	Y	P	K	L	R	E	S	G	W	Q	G	Y	W	I	D	A	A	S	S	L	R	M	K	D	D	A	I	I	I	L	D	P	V	N	Q	D	V	I	T	D	G	L	N	N	G	I	R	T	F	V	G	G	N	C	T	V	S	L	M	L	M	S	L
Query Conservation
Alig confidence																													.	.																					.						.	.	.	.	.
Template Conservation																													.	.																					.						.	.	.	.	.
Template Sequence		K	V	D	I	I	V	D	A	T	P	G	G	I	G	A	K	N	K	P	L	Y	E	K	A	G	V	K	.	.	A	I	F	Q	G	G	E	K	A	D	V	A	E	V	S	F	V	A	Q	A	.	N	Y	E	A	A	.	.	.	.	.	L	G	K	N	Y	V	R	V	V	S	C	N	T	T	G	L	V	R	T	L
Template Known Secondary structure		T		S							S	T	T												T	T			.	.					T	T	S		G	G	G	S	S								.		G	G	G	G	.	.	.	.	.	T	T		S
Template Predicted Secondary structure																													.	.																					.						.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130						.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	L	F	A	N	D	L	V	D	W	V	S	V	A	T	Y	Q	A	A	S	G	G	G	A	R	H	M	R	E	L	L	T	Q	M	G	H	L	Y	G	H	V	A	D	E	L	A	T	P	S	S	A	I	L	D	I	E	R	K	V	T	T	L	T	R	S	G	E	L	P	V	D	N	F	G	V	P	L	A	G
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	A	I	R	E	Y	A	D	Y	V	Y	A	V	M	I	R	R	A	A	D	P	N	D	T	K	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	I	N
Template Known Secondary structure					G	G	G												S	S		T	T			S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.																																																			.	.	180
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	I	P	W	I	D	K	Q	L	D	N	G	Q	S	R	E	E	W	K	G	Q	A	E	T	N	K	I	L	N	T	S	S	V	I	P	V	D	G	L	C	V	R	V	G	A	L	R	C	H	S	Q	A	F	T	I	K	L	K	K	D	V	S	I	P	T	V	E	E	L	L	A	A	H	N	P	W	A	K	V
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.																	.	.	.	.	.																																								.	.	.
Template Conservation								.	.	.	.	.	.	.	.																	.	.	.	.	.																																								.	.	.
Template Sequence		A	I	K	P	T	V	.	.	.	.	.	.	.	.	E	V	P	S	H	H	G	P	D	V	Q	T	V	I	P	I	.	.	.	.	.	N	I	E	T	M	A	F	V	V	P	T	T	L	M	H	V	H	S	V	M	V	E	L	K	K	P	L	T	K	D	D	V	I	D	I	F	E	N	T	.	.	.	T	R	V
Template Known Secondary structure								.	.	.	.	.	.	.	.	S	S	S		T						T	T	T	S			.	.	.	.	.										S			S											S	S													T	S	.	.	.	T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.																	.	.	.	.	.																																								.	.	.
Template SS confidence
		181	.	.	.	.	.									.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.						.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.				.	.	.
		305	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	N	D	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	F	E	K
Template Known Secondary structure						G
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions