Job Description P0A9Q9 Confidence 100.00% Date Thu Jan 5 11:11:02 GMT 2012 Rank 49 Aligned Residues 301 % Identity 15% Template c1obfO_ PDB info PDB header:glycolytic pathway Chain: O: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase; PDBTitle: the crystal structure of glyceraldehyde 3-phosphate2 dehydrogenase from alcaligenes xylosoxidans at 1.73 resolution. Resolution 1.7 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.																								.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	N	V	G	F	I	G	W	R	G	M	V	G	S	V	L	M	Q	R	M	V	E	E	R	D	F	D	A	I	R	P	V	F	F	S	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	G	Q	A	A	P	S	F	G	G	T	T	G	T	L	Q	D	A	F
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.
Template Sequence		I	R	V	A	I	N	G	.	Y	G	R	I	G	R	N	I	L	R	A	H	Y	E	G	G	K	S	H	D	I	E	I	V	A	I	N	D	L	G	D	P	K	T	N	A	H	L	T	R	Y	D	T	A	H	G	K	F	P	G	T	V	S	V	N	G	S	Y	M	V	V	N	G	D	K	I	R	V	D	A	N	R
Template Known Secondary structure									.		S													T	T	S		S	S									S	S													T	T	T				S	S						T	T					T	T									S
Template Predicted Secondary structure									.
Template SS confidence
		2	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		59	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure								.	.	.	.
Query SS confidence								.	.	.	.
Query Sequence		D	L	E	A	L	K	.	.	.	.	A	L	D	I	I	V	T	C	Q	G	G	D	Y	T	N	E	I	Y	P	K	L	R	E	S	G	W	Q	G	Y	W	I	D	A	A	S	S	L	R	M	K	D	D	A	I	I	I	L	D	P	V	N	Q	D	V	I	T	D	G	L	N	N	G	I	R	T	F	V	G	G	N
Query Conservation								.	.	.	.
Alig confidence								.	.	.	.																																.	.	.																										.	.	.	.	.
Template Conservation																																											.	.	.																										.	.	.	.	.
Template Sequence		N	P	A	Q	L	P	W	G	A	L	K	V	D	V	V	L	E	C	T	G	F	F	T	T	K	E	K	A	G	A	H	I	K	G	G	A	K	K	V	I	I	.	.	.	S	A	P	G	G	A	D	V	D	A	T	V	V	Y	G	V	N	H	G	T	L	K	S	T	D	.	.	.	.	.	T	V	I	S	N	A
Template Known Secondary structure			G	G	G	S		T	T	T	T	T		S						S	S	S			S											T		S					.	.	.	S	S				T	T	S	S					T	T	T	S	G	G	G			T	T		.	.	.	.	.
Template Predicted Secondary structure																																											.	.	.																										.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.						.	.	.	150	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	T	V	S	L	M	L	M	S	L	G	G	L	F	A	N	D	L	V	D	W	V	S	V	A	T	Y	Q	A	A	S	G	G	G	A	R	H	M	R	E	L	L	T	Q	M	G	H	L	Y	G	H	V	A	D	E	L	A	T	P	S	S	A	I	L	D	I	E	R	K	V	T	T	L	T	R	S	G	E	L	P
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	T	T	N	C	L	A	P	L	V	K	P	L	N	D	K	L	G	L	Q	D	G	L	M	T	T	V	H	A	Y	T	N	N	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	D	V	Y	H	E
Template Known Secondary structure																		T															T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S					S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.																																							.	.	190	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	N	F	G	V	P	L	A	G	S	L	I	P	W	I	D	K	Q	L	D	N	G	Q	S	R	E	E	W	K	G	Q	A	E	T	N	K	I	L	N	T	S	S	V	I	P	V	D	G	L	C	V	R	V	G	A	L	R	C	H	S	Q	A	F	T	I	K	L	K	K	D	V	S	I	P	T	V	E	E	L
Query Conservation
Alig confidence																	.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Sequence		D	L	R	R	A	R	S	A	T	M	S	M	I	P	T	.	.	.	.	.	K	T	G	A	A	A	A	V	G	D	V	L	P	E	L	D	G	.	.	.	.	.	.	.	.	K	L	N	G	Y	A	I	R	V	P	T	I	N	V	S	I	V	D	L	S	F	V	A	K	R	N	T	T	V	E	E	V	N	G	I
Template Known Secondary structure		S	T	T	T	T	S		T	T	T						.	.	.	.	.													G	G	G	T	T	.	.	.	.	.	.	.	.	S									S		S	S											S	S
Template Predicted Secondary structure																	.	.	.	.	.																		.	.	.	.	.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210						.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.									.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		295	.	.	.	.	300	.			.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		L	A	A	H	N	P	W	.	.	A	K	V	V	P	N	D	R	E	I	T	M	R	E	L	T	P	A	A	V	T	G	T	L	T	T	P	V	G	R	L	R	K	L	N	M	G	P	E	F	L	S	A	F	T	V	G	D	Q	L	L	W	G	A	A	E	P	L	R	R	M	L	R	Q	L	A
Query Conservation									.	.
Alig confidence									.	.											.	.	.	.																																					.
Template Conservation																					.	.	.	.																																					.
Template Sequence		L	K	A	A	S	E	G	E	L	K	G	I	L	D	Y	N	T	E	P	.	.	.	.	L	V	S	V	D	Y	N	H	D	P	A	S	S	T	V	D	A	S	L	T	K	V	S	G	R	L	V	K	V	S	S	W	Y	D	N	E	.	W	G	F	S	N	R	M	L	D	T	T	V	A	L	M
Template Known Secondary structure								T	T	T	T	T	T						S		.	.	.	.			G	G	G	G	T	T				S					G	G	G					T	T										T	T	.
Template Predicted Secondary structure																					.	.	.	.																																					.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.					.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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