 |
| Job Description | P0A9Q9 | | Confidence | 93.06% | Date | Thu Jan 5 11:11:02 GMT 2012 |
| Rank | 484 | Aligned Residues | 71 |
| % Identity | 21% | Template | c1llcA_ |
| PDB info |
PDB header:oxidoreductase(choh(d)-nad(a)) | Chain: A: PDB Molecule:l-lactate dehydrogenase; |
PDBTitle: structure determination of the allosteric l-lactate dehydrogenase from2 lactobacillus casei at 3.0 angstroms resolution
|
| Resolution | 3.00 Å |
|
| | |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
|
|
|
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
| Predicted Secondary structure | |
 | | | |  |
|
|
|
|  | | | | | | | | | | |
|
|
|
|
|
|
| | | | | | | | |
|
|
|
|
| | | | | |
|
|
|
| | . | . | . | . | | | | |
|
|
| | | |
|
|
|
|
| | | | |
|
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
N | V | G | F | I | G | W | R | G | M | V | G | S | V | L | M | Q | R | M | V | E | E | R | D | F | D | A | I | R | P | V | F | F | S | T | S | Q | L | G | Q | A | A | P | S | F | G | G | T | T | G | . |
. |
. |
. |
T | L | Q | D | A | F | D | L | E | A | L | K | A | L | D | I | I | V | T | C | Q | G |
| Query Conservation | |
|
|
|
|
|
|
|
|
| |
|
| |
|
|
|
|
|
| | |
| | | | | | | |
| | | | |
| | | | |
|
| | | | | | | | |
| . | . | . | . | | | | | | | | | | | | | | |
|
|
|
| |
| |
|
| Alig confidence | |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
| |
|
|
|
| . |
| |
|
| | | |
| | |
| | | | | | | |
|
| |
| |
| | | | | | | |
| | | |
|
| | | | | | | | | | | |
| |
| | | |
|
|
| |
|
|
|
|
|
|
|
|
|
|
| Template Sequence | |
K | V | I | L | V | G | D | . |
G | A | V | G | S | S | Y | A | F | A | M | V | L | Q | G | I | A | Q | E | I | G | I | V | D | I | F | K | D | K | T | K | G | D | A | I | D | L | S | N | A | L | P | F | T | S | P | K | K | I | Y | S | A | E | Y | S | D | A | K | D | A | D | L | V | V | I | T | A | G |
| Template Known Secondary structure | |
| | | | S |
| T | . | T | | | | | | | | | | | | | | T |
|
| S | S | | | |
|
| S |
| S | | | | | | | | | | | T | T | S |
| T | T | S |
|
|
|
| B |
|
|
| T | T | T | T | T | S | S |
| S | | | |
| B | T |
|
| Template Predicted Secondary structure | |
| | | | |
|
| . |
| | | | | | | | | | | | |
|
|
|
|
| | | | | | |
|
| | | | | | | | | | | | | | | |
|
|
|
|
| | | | |
|
|
| | | | |
|
|
|
| | | | |
|
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
23 | . | . | . | . | . | . | |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
