Job Description P0A9Q9 Confidence 100.00% Date Thu Jan 5 11:11:02 GMT 2012 Rank 46 Aligned Residues 302 % Identity 15% Template c1ihxD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase; PDBTitle: crystal structure of two d-glyceraldehyde-3-phosphate2 dehydrogenase complexes: a case of asymmetry Resolution 2.80 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.												.	.	.	.	.	.	.	40	.	.	.											.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Query Sequence		N	V	G	F	I	G	W	R	G	M	V	G	S	V	L	M	Q	R	M	V	E	E	R	D	F	D	A	I	R	P	.	.	.	.	.	.	.	.	.	.	.	V	F	F	S	T	S	Q	L	G	Q	A	.	.	.	.	.	.	.	.	.	.	A	P	S	F	G	G	T	T	G	T	L	Q	D	A	F	D	L	E
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Alig confidence									.																.							.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Template Conservation									.																.
Template Sequence		K	I	G	I	N	G	F	.	G	R	I	G	R	L	V	L	R	T	A	L	E	M	G	.	A	Q	V	V	A	V	N	D	P	F	I	A	L	E	Y	M	V	Y	M	F	K	Y	D	S	T	H	G	M	F	K	G	E	V	K	V	E	D	G	A	L	V	V	D	G	K	K	I	T	V	F	N	E	M	K	P	E
Template Known Secondary structure									.	S											T	T	T	T	.									T	T	S													T	T	T					S						S	S					T	T									S	S	G	G
Template Predicted Secondary structure									.																.
Template SS confidence
		2	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		62	.	.					.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.
Query SS confidence					.	.	.	.
Query Sequence		A	L	K	.	.	.	.	A	L	D	I	I	V	T	C	Q	G	G	D	Y	T	N	E	I	Y	P	K	L	R	E	S	G	W	Q	G	Y	W	I	D	A	A	S	S	L	R	M	K	D	D	A	I	I	I	L	D	P	V	N	Q	D	V	I	T	D	G	L	N	N	G	I	R	T	F	V	G	G	N	C	T	V
Query Conservation					.	.	.	.
Alig confidence					.	.	.	.																												.	.							.	.	.																						.	.	.	.
Template Conservation																																				.	.							.	.	.																						.	.	.	.
Template Sequence		N	I	P	W	S	K	A	G	A	E	Y	I	V	E	S	T	G	V	F	T	T	I	E	K	A	S	A	H	F	K	G	G	A	K	.	.	K	V	I	I	S	A	.	.	.	P	S	A	D	A	P	M	F	V	C	G	V	N	L	E	K	Y	S	K	D	M	.	.	.	.	K	V	V	S	N	A	S	C	T	T
Template Known Secondary structure		G							T								S	S	S			S					G	G	G	G	T	T	T		S	.	.					S	S	.	.	.			S	S	S		B			T	T	T	S	G	G	G			T	T		.	.	.	.
Template Predicted Secondary structure																																				.	.							.	.	.																						.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120				.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.					.	.	.	.	.	.	.	.	150	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	M	L	M	S	L	G	G	L	F	A	N	D	L	V	D	W	V	S	V	A	T	Y	Q	A	A	S	G	G	G	A	R	H	M	R	E	L	L	T	Q	M	G	H	L	Y	G	H	V	A	D	E	L	A	T	P	S	S	A	I	L	D	I	E	R	K	V	T	T	L	T	R	S	G	E	L	P	V	D	N
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	C	L	A	P	V	A	K	V	L	H	E	N	F	E	I	V	E	G	L	M	T	T	V	H	A	V	T	A	T	Q	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	D	G	P	S	A	K	D	W	R
Template Known Secondary structure																														T	T	S	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S				T	T		T	G
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.																																						.	.	.	.	.	.	190	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	V	P	L	A	G	S	L	I	P	W	I	D	K	Q	L	D	N	G	Q	S	R	E	E	W	K	G	Q	A	E	T	N	K	I	L	N	T	S	S	V	I	P	V	D	G	L	C	V	R	V	G	A	L	R	C	H	S	Q	A	F	T	I	K	L	K	K	D	V	S	I	P	T	V	E	E	L	L	A	A
Query Conservation
Alig confidence														.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Sequence		G	G	R	G	A	A	Q	N	I	I	P	S	.	.	.	.	.	S	T	G	A	A	K	A	V	G	K	V	I	P	E	L	D	G	.	.	.	.	.	.	.	.	K	L	T	G	M	A	F	R	V	P	T	P	N	V	S	V	V	D	L	T	V	R	L	G	K	E	C	S	Y	D	D	I	K	A	A	M	K	T
Template Known Secondary structure		G	G	S	B	T	T	T						.	.	.	.	.												S	G	G	G	T	T	.	.	.	.	.	.	.	.	S									S		S	S											S	S
Template Predicted Secondary structure														.	.	.	.	.																		.	.	.	.	.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.						.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.									.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	N	P	W	A	K	V	V	P	N	D	R	E	I	T	M	R	E	L	T	P	A	A	V	T	G	T	L	T	T	P	V	G	R	L	R	K	L	N	M	G	P	E	F	L	S	A	F	T	V	G	D	Q	L	L	W	G	A	A	E	P	L	R	R	M	L	R	Q	L	A
Query Conservation
Alig confidence							.																																																	.
Template Conservation							.																																																	.
Template Sequence		A	S	E	G	P	.	L	Q	G	V	L	G	Y	T	E	D	D	V	V	S	C	D	F	T	G	D	N	R	S	S	I	F	D	A	K	A	G	I	Q	L	S	K	T	F	V	K	V	V	S	W	Y	D	N	E	.	F	G	Y	S	Q	R	V	I	D	L	I	K	H	M	Q
Template Known Secondary structure			T	T	T	T	.	T	T	T	T						S				G	G	G	G	T	T				S					T	T	T						T	T										T	T	.
Template Predicted Secondary structure							.																																																	.
Template SS confidence
		262	.	.	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.		.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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