Job Description P0A9Q9 Confidence 99.95% Date Thu Jan 5 11:11:02 GMT 2012 Rank 59 Aligned Residues 299 % Identity 18% Template c1i32D_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase; PDBTitle: leishmania mexicana glyceraldehyde-3-phosphate2 dehydrogenase in complex with inhibitors Resolution 2.60 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.					.	.	.	.	.	30	.	.												.	.	.	.	.	.	.	40	.	.	.	.																			.	.	.	.
Predicted Secondary structure																									.	.	.	.									.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.									.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	N	V	G	F	I	G	W	R	G	M	V	G	S	V	L	M	Q	R	M	V	E	E	.	.	.	.	R	D	F	D	A	I	R	P	.	.	.	.	.	.	.	.	.	.	.	V	F	F	S	T	S	Q	L	G	Q	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	F	G
Query Conservation																									.	.	.	.									.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.															.	.	.	.									.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.
Template Sequence		I	K	V	G	I	N	G	F	.	G	R	I	G	R	M	V	F	Q	A	I	C	D	Q	G	L	I	G	T	E	I	D	V	V	A	V	V	D	M	S	T	N	A	E	Y	F	A	Y	Q	M	K	H	D	T	V	H	G	R	P	K	Y	T	V	E	A	V	K	S	S	P	S	V	E	T	A	D	V	L	V	V	N
Template Known Secondary structure										.	S													T	T		B	T	T	T									S															T	T	T		S		S	S							S	S	T	T		S	S							T
Template Predicted Secondary structure										.
Template SS confidence
		3	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		49	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.					.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure							.													.	.	.	.
Query SS confidence							.													.	.	.	.
Query Sequence		G	T	T	G	T	.	L	Q	D	A	F	D	L	E	A	L	K	A	.	.	.	.	L	D	I	I	V	T	C	Q	G	G	D	Y	T	N	E	I	Y	P	K	L	R	E	S	G	W	Q	G	Y	W	I	D	A	A	S	S	L	R	M	K	D	D	A	I	I	I	L	D	P	V	N	Q	D	V	I	T	D	G	L
Query Conservation							.													.	.	.	.
Alig confidence							.													.	.	.	.																																				.	.	.	.
Template Conservation																																																											.	.	.	.
Template Sequence		G	H	R	I	K	C	V	K	A	Q	R	N	P	A	D	L	P	W	G	K	L	G	V	D	Y	V	I	E	S	T	G	L	F	T	D	K	L	K	A	E	G	H	I	K	G	G	A	K	K	V	V	I	S	A	P	A	S	.	.	.	.	G	G	A	K	T	I	V	M	G	V	N	Q	H	E	Y	S	P	A	S
Template Known Secondary structure		T										S	S	G	G	G	S						T								S	S	S			B					T					T	T		S					S	S			B	.	.	.	.	S	S						T	T	T	S	G	G	G			T	T	T
Template Predicted Secondary structure																																																											.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.					.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		N	N	G	I	R	T	F	V	G	G	N	C	T	V	S	L	M	L	M	S	L	G	G	L	.	F	A	N	D	L	V	D	W	V	S	V	A	T	Y	Q	A	A	S	G	G	G	A	R	H	M	R	E	L	L	T	Q	M	G	H	L	Y	G	H	V	A	D	E	L	A	T	P	S	S	A	I	L	D	I	E	R
Query Conservation																										.
Alig confidence			.	.	.																					.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	.	.	.	H	V	V	S	N	A	S	C	T	T	N	C	L	A	P	I	V	H	V	L	T	K	E	N	F	G	I	E	T	G	L	M	T	T	I	H	S	Y	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			.	.	.	S																						T	T				S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure			.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		158				.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	T	T	L	T	R	S	G	E	L	P	V	D	N	F	G	V	P	L	A	G	S	L	I	P	W	I	D	K	Q	L	D	N	G	Q	S	R	E	E	W	K	G	Q	A	E	T	N	K	I	L	N	T	S	S	V	I	P	V	D	G	L	C	V	R	V	G	A	L	R	C	H	S	Q	A	F	T	I	K	L
Query Conservation
Alig confidence																												.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Sequence		A	T	Q	K	T	V	D	G	V	S	L	K	D	W	R	G	G	R	A	A	A	V	N	I	I	P	.	.	.	.	.	S	T	T	G	A	A	K	A	V	G	M	V	I	P	S	T	K	G	.	.	.	.	.	.	.	.	K	L	T	G	M	S	F	R	V	P	T	P	D	V	S	V	V	D	L	T	F	R	A
Template Known Secondary structure		T	T	S	B	S	S	S				S	S		T	G	G	G	S	B	G	G	G					.	.	.	.	.				S									S	G	G	G	T	T	.	.	.	.	.	.	.	.	T									S		S	S
Template Predicted Secondary structure																												.	.	.	.	.																			.	.	.	.	.	.	.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.						.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.									.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.			.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.										.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure																						.	.																																					.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.																																					.	.	.	.	.	.	.	.	.
Query Sequence		K	K	D	V	S	I	P	T	V	E	E	L	L	A	A	H	N	P	W	A	.	.	K	V	V	P	N	D	R	E	I	T	M	R	E	L	T	P	A	A	V	T	G	T	L	T	T	P	V	G	R	L	R	K	L	N	M	G	.	.	.	.	.	.	.	.	.	P	E	F	L	S	A	F	T	V	G	D	Q	L
Query Conservation																						.	.																																					.	.	.	.	.	.	.	.	.
Alig confidence																						.	.										.	.	.	.															.	.	.	.						.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.															.	.	.	.
Template Sequence		T	R	D	T	S	I	Q	E	I	D	K	A	I	K	K	A	A	Q	T	Y	M	K	G	I	L	G	F	T	D	E	E	.	.	.	.	L	V	S	A	D	F	I	N	D	N	R	S	S	V	.	.	.	.	Y	D	S	K	A	T	L	Q	N	N	L	P	G	E	K	R	F	F	K	V	V	S	W	Y	D	N	E
Template Known Secondary structure		S	S																	T	T	T	T	T	T						S		.	.	.	.			G	G	G	G	T	T				S			.	.	.	.								T	T	S		T	T		S	S										T	T
Template Predicted Secondary structure																																	.	.	.	.															.	.	.	.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.					.	.	.	.	300	.	.	.	.	.	.	.	.	.					310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	W	G	A	A	E	P	L	R	R	M	L	R	Q	L	A
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	W	A	Y	S	H	R	V	V	D	L	V	R	Y	M	A
Template Known Secondary structure		.
Template Predicted Secondary structure		.
Template SS confidence
			337	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions