Job Description P0A9Q9 Confidence 100.00% Date Thu Jan 5 11:11:02 GMT 2012 Rank 31 Aligned Residues 278 % Identity 15% Template c1b7gO_ PDB info PDB header:oxidoreductase Chain: O: PDB Molecule:protein (glyceraldehyde 3-phosphate dehydrogenase); PDBTitle: glyceraldehyde 3-phosphate dehydrogenase Resolution 2.05 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.															.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	N	V	G	F	I	G	W	R	G	M	V	G	S	V	L	M	Q	R	M	V	E	E	R	D	F	D	A	I	R	P	V	F	F	S	T	S	Q	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	A	P	S	F	G	G	T	T	G	T	L	Q	D	A	F	D	L	E	A	L	K	A	L
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation										.																																																															.
Template Sequence		M	V	N	V	A	V	N	G	.	Y	G	T	I	G	K	R	V	A	D	A	I	I	K	Q	P	D	M	K	L	V	G	V	A	K	T	S	P	N	Y	E	A	F	I	A	H	R	R	G	I	R	I	Y	V	P	Q	Q	S	I	K	K	F	E	E	S	G	I	P	V	A	G	T	.	V	E	D	L	I	K	T	S
Template Known Secondary structure										.		S												T		T	T									S	S		S									T	T							G	G	G						T	T	T							.
Template Predicted Secondary structure										.																																																															.
Template SS confidence
		1	.	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	I	V	T	C	Q	G	G	D	Y	T	N	E	I	Y	P	K	L	R	E	S	G	W	Q	G	Y	W	I	D	A	A	S	S	L	R	M	K	D	D	A	I	I	I	L	D	P	V	N	Q	D	V	I	T	D	G	L	N	N	G	I	R	T	F	V	G	G	N	C	T	V	S	L	M	L	M	S	L	G	G
Query Conservation
Alig confidence																											.	.										.																	.	.	.	.	.
Template Conservation																											.	.										.																	.	.	.	.	.
Template Sequence		D	I	V	V	D	T	T	P	N	G	V	G	A	Q	Y	K	P	I	Y	L	Q	L	Q	R	N	.	.	A	I	F	Q	G	G	E	K	A	.	E	V	A	D	I	S	F	S	A	L	C	N	Y	N	E	A	.	.	.	.	.	L	G	K	K	Y	I	R	V	V	S	C	N	T	T	A	L	L	R	T	I	C	T
Template Known Secondary structure		S							S	T	T												T	T			.	.					T	T	S		G	.	G	G	S	S													.	.	.	.	.	T	T		S
Template Predicted Secondary structure																											.	.										.																	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.						.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	A	N	D	L	V	D	W	V	S	V	A	T	Y	Q	A	A	S	G	G	G	A	R	H	M	R	E	L	L	T	Q	M	G	H	L	Y	G	H	V	A	D	E	L	A	T	P	S	S	A	I	L	D	I	E	R	K	V	T	T	L	T	R	S	G	E	L	P	V	D	N	F	G	V	P	L	A	G	S	L
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	N	K	V	S	K	V	E	K	V	R	A	T	I	V	R	R	A	A	D	Q	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	K	G	P	I	N	S	L	V	P	D	P	A	T
Template Known Secondary structure				T	T	S													S	S		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S				S	S					S	S	S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.																																											.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	W	I	D	K	Q	L	D	N	G	Q	S	R	E	E	W	K	G	Q	A	E	T	N	K	I	L	N	T	S	S	V	I	P	V	D	G	L	C	V	R	V	G	A	L	R	C	H	S	Q	A	F	T	I	K	L	K	K	D	V	S	I	P	T	V	E	E	L	L	A	A	H	N	P	W	A	K	V	V	P
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.																																									.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.																																									.	.	.
Template Sequence		V	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	H	A	K	D	V	N	S	V	I	R	N	.	.	.	L	D	I	A	T	M	A	V	I	A	P	T	T	L	M	H	M	H	F	I	N	I	T	L	K	D	K	V	E	K	K	D	I	L	S	V	L	E	N	T	.	.	.	P	R	I	V	L
Template Known Secondary structure		S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	T							T	T	S	T	T	.	.	.											S		S	S											S	S													T		.	.	.	T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.																																									.	.	.
Template SS confidence
		189	190	.															.	.	.	.	.	.	.	.	200	.	.	.				.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.				.	.	.	.	.
		307	.	.	310					.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.					.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure						.	.	.	.																										.	.	.	.
Query SS confidence						.	.	.	.																										.	.	.	.
Query Sequence		N	D	R	E	.	.	.	.	I	T	M	R	E	L	T	P	A	A	V	T	G	T	L	T	T	P	V	G	R	L	R	K	L	.	.	.	.	N	M	G	P	E	F	L	S	A	F	T	V	G	D	Q
Query Conservation						.	.	.	.																										.	.	.	.
Alig confidence						.	.	.	.																										.	.	.	.
Template Conservation
Template Sequence		I	S	S	K	Y	D	A	E	A	T	A	E	L	V	E	V	A	R	D	L	K	R	D	R	N	D	I	P	E	V	M	I	F	S	D	S	I	Y	V	K	D	D	E	V	M	L	M	Y	A	V	H	Q
Template Known Secondary structure				S	S	S	S			S											T	T		G	G	G				S					G	G	G					T	T										T
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions