Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABU5
Confidence33.44%DateThu Jan 5 11:16:24 GMT 2012
Rank195Aligned Residues87
% Identity13%Templated1p3da1
SCOP infoMurCD N-terminal domain MurCD N-terminal domain MurCD N-terminal domain
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  MKKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQQVDVINHLTGEAMTETRNVLIEAARITRGEIRPLAQ
Query Conservation 









 
  

 
  
   
   
 


  
   

                   
    
           
  
Alig confidence 






........
































...............
















Template Conservation   
 
 

........


 

 



  
   
  
   
        ............... 
               
Template Sequence  VQQIHFI. . . . . . . . GIGGAGXSGIAEILLNEGYQISGSDIADGVVTQ. . . . . . . . . . . . . . . RLAQAGAKIYIGHAEEH
Template Known Secondary structure 

........TTTSTTT
S

S...............TT
S

GGG
Template Predicted Secondary structure 

........









...............





Template SS confidence 















































































   18.20.... .....30.........40.........50....... ..60.........70....
 
   81........90.........100.........110.........120.........130.
Predicted Secondary structure 




















Query SS confidence 


















































Query Sequence  ADAAELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQAGKPL
Query Conservation 
   









 
    
            
  
  

       
 
Alig confidence 

..













...................













Template Conservation 
 ..  
 

 



   ................... 
 
  
   

 
Template Sequence  IE. . GASVVVVSSAIKDD. . . . . . . . . . . . . . . . . . . NPELVTSKQKRIPV
Template Known Secondary structure  GT..T
S
TTS
TT...................
TT

Template Predicted Secondary structure 

..









...................




Template SS confidence 


















































   75. ...80.........90 .........100....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions