Job Description P0ABU5 Confidence 100.00% Date Thu Jan 5 11:16:24 GMT 2012 Rank 4 Aligned Residues 180 % Identity 19% Template c3uk7B_ PDB info PDB header:transferase Chain: B: PDB Molecule:class i glutamine amidotransferase-like domain-containing PDBTitle: crystal structure of arabidopsis thaliana dj-1d Resolution 2.05 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	K	I	G	V	I	L	S	G	C	G	V	Y	D	G	S	E	I	H	E	A	V	L	T	L	L	A	I	S	R	S	G	A	Q	A	V	C	F	A	P	D	K	Q	Q	V	D	V	I	N	H	L	T	G	E	A	M	T	E	T	R	N	V	L	I	E	A	A	R	I	T	R	G	E	I	R	P	L	A	Q
Query Conservation
Alig confidence											.	.	.	.	.																																											.	.
Template Conservation											.	.	.	.	.																																											.	.
Template Sequence		S	R	T	V	L	I	L	C	G	.	.	.	.	.	D	Y	X	E	D	Y	E	V	X	V	P	F	Q	A	L	Q	A	F	G	I	T	V	H	T	V	C	P	G	K	K	A	G	D	S	C	P	T	A	V	H	D	F	.	.	C	G	H	Q	T	Y	F	E	S	R	G	H	N	F	T	L	N	A	T	F	D	E
Template Known Secondary structure											.	.	.	.	.	T	T																T	T								T	T			T	T											.	.	S	S	S	S	S													S		G	G	G
Template Predicted Secondary structure											.	.	.	.	.																																											.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.						.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		A	D	A	A	E	L	D	A	L	I	V	P	G	G	F	G	A	A	K	N	L	S	N	F	A	S	L	G	S	E	C	T	V	D	R	E	L	K	A	L	A	Q	A	M	H	Q	A	G	K	P	L	G	F	M	C	I	A	P	A	M	L	P	K	I	.	F	D	F	P	L	R	L	T	I	G	T	D	I	D	T
Query Conservation																																																																		.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.																									.													.									.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.																									.																						.	.
Template Sequence		V	D	L	S	K	Y	D	G	L	V	I	P	G	G	R	A	.	.	.	.	.	.	.	.	.	.	.	P	E	Y	L	A	L	T	A	S	V	V	E	L	V	K	E	F	S	R	S	G	K	P	I	.	A	S	I	H	G	Q	L	I	L	A	A	A	D	T	V	N	G	R	K	C	T	.	.	A	Y	A	T	V
Template Known Secondary structure				G	G	G		S							B	T		.	.	.	.	.	.	.	.	.	.	.					T	T														T	T				.					T								T			T	T					.	.			G	G	G
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.																									.																						.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.												.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	V	L	E	E	M	G	A	E	H	V	P	C	P	V	D	D	I	V	V	D	E	D	N	K	I	V	T	T	P	A	Y	M	L	A	Q	N	I	A	E	A	A
Query Conservation
Alig confidence																								.
Template Conservation																								.
Template Sequence		G	P	S	L	V	A	A	G	A	K	W	V	E	P	I	T	P	D	V	C	V	V	.	D	G	S	L	I	T	A	A	T	Y	E	G	H	P	E	F	I	Q	L	F
Template Known Secondary structure								T	T							S	S	T	T					.		T	T					S	S	G	G	G
Template Predicted Secondary structure																								.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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