Job Description P0ABU5 Confidence 100.00% Date Thu Jan 5 11:16:24 GMT 2012 Rank 6 Aligned Residues 195 % Identity 23% Template c3n7tA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:macrophage binding protein; PDBTitle: crystal structure of a macrophage binding protein from coccidioides2 immitis Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.							.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.						.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.																																.	.	.	.	.
Query SS confidence																.	.	.	.	.	.																																.	.	.	.	.
Query Sequence		M	K	K	I	G	V	I	L	S	G	C	G	V	Y	.	.	.	.	.	.	D	G	S	E	I	H	E	A	V	L	T	L	L	A	I	S	R	S	G	A	Q	A	V	C	F	A	P	D	K	Q	Q	.	.	.	.	.	V	D	V	I	N	H	L	T	G	E	A	M	T	E	T	R	N	V	L	I	E	A	A	R
Query Conservation																.	.	.	.	.	.																																.	.	.	.	.
Alig confidence																.	.	.	.	.	.																																.	.	.	.	.
Template Conservation
Template Sequence		R	K	A	L	L	A	I	T	S	A	H	P	P	F	W	P	D	G	K	R	T	G	L	F	F	S	E	A	L	H	P	F	N	E	L	T	A	A	G	F	E	V	D	V	A	S	E	T	G	T	F	G	W	D	E	H	S	L	T	Q	E	Y	L	S	K	E	D	E	K	V	L	H	S	E	H	N	H	F	M	E
Template Known Secondary structure		S												B		S	T	T	S		B			B															T	T								S	S	S				B		S	G	G	G	S	G	G	G										T		S	S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		I	T	R	G	E	I	R	P	L	A	Q	A	D	A	A	E	L	D	A	L	I	V	P	G	G	F	G	A	A	K	N	L	S	N	F	A	S	L	G	S	E	C	T	V	D	R	E	L	K	A	L	A	Q	A	M	H	Q	A	G	K	P	L	G	F	M	C	I	A	P	A	M	L	P	K	I	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		K	M	N	K	Q	V	F	K	A	G	D	L	A	P	H	D	Y	G	L	M	F	V	C	G	G	H	G	A	L	Y	D	F	P	H	.	.	.	.	.	.	.	.	.	.	A	K	H	L	Q	N	I	A	Q	D	I	Y	K	R	G	G	V	I	G	A	V	C	H	G	P	A	M	L	P	G	I	H	D	E	N	G
Template Known Secondary structure										G	G	G	S		G	G	G		S							S	T	T					G	G	G	.	.	.	.	.	.	.	.	.	.														T	T							T	T	G	G	G	G	G	G	G		B		T	T	S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.											120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
				145	.	.	.	.	150	.	.	.	.	.	.																		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.					190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure		.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.																.	.	.	.
Query SS confidence		.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.																.	.	.	.
Query Sequence		.	.	F	D	F	P	L	R	L	T	I	G	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	T	A	E	V	L	E	E	M	G	A	E	H	V	P	C	P	.	V	D	D	I	V	V	D	E	D	N	K	I	V	T	T	.	.	.	.	P	A	Y	M	L	A	Q	N	I	A	E
Query Conservation		.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.																.	.	.	.
Alig confidence		.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.																.	.	.	.
Template Conservation
Template Sequence		D	S	V	I	K	D	K	T	V	T	G	F	T	T	K	G	E	I	M	I	K	V	I	D	K	M	R	E	D	H	L	H	T	I	A	D	M	A	Q	T	A	N	A	E	Y	V	P	P	E	D	P	W	D	D	F	C	K	V	D	G	R	I	V	T	G	A	N	P	Q	S	A	T	N	T	A	R	D	T	I	K
Template Known Secondary structure		S	B	T	T	T	T														T	T								T	T											T	T							S	S	T	T	S							T	T						S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		201	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	S	G	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Y	E	G	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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