Job Description P0ABU5 Confidence 99.89% Date Thu Jan 5 11:16:24 GMT 2012 Rank 23 Aligned Residues 162 % Identity 20% Template c3mgkA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:intracellular protease/amidase related enzyme PDBTitle: crystal structure of probable protease/amidase from2 clostridium acetobutylicum atcc 824 Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		K	I	G	V	I	L	S	G	C	G	V	Y	D	G	S	E	I	H	E	A	V	L	T	L	L	A	I	S	R	S	G	.	.	A	Q	A	V	C	F	A	P	D	K	Q	Q	V	D	V	I	N	H	L	T	G	E	A	M	T	E	T	R	N	V	L	I	E	A	A	R	I	T	R	G	E	I	R	P	L	A	Q
Query Conservation																																	.	.
Alig confidence								.	.	.	.	.																					.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	D	V	L	L	.	.	.	.	.	F	N	K	F	E	T	L	D	V	F	G	P	V	E	I	F	G	N	L	Q	D	D	F	E	L	N	F	I	S	S	D	G	G	L	V	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Q	K	V	R	V	E	T	S	L	Y	T	R	D
Template Known Secondary structure								.	.	.	.	.		T	T														T	T		T	T	T								S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T							B
Template Predicted Secondary structure								.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.						10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.																			.	.	.	50	.	.	.	.	.	.	.	.	.	60
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		A	D	A	A	E	L	D	A	L	I	V	P	G	G	F	G	A	A	K	N	L	S	N	F	A	S	L	G	S	E	C	T	V	D	R	E	L	K	A	L	A	Q	A	M	H	Q	A	G	K	P	L	G	F	M	C	I	A	P	A	M	L	P	K	I	.	F	D	F	P	L	R	L	T	I	G	T	D	I	D	T
Query Conservation																																																																		.
Alig confidence				.	.											.	.	.	.	.	.	.	.	.	.	.																																								.									.	.
Template Conservation				.	.											.	.	.	.	.	.	.	.	.	.	.																																																	.	.
Template Sequence		E	N	.	.	I	E	K	I	L	F	V	P	G	G	.	.	.	.	.	.	.	.	.	.	.	S	G	T	R	E	K	V	N	D	D	N	F	I	N	F	I	G	N	M	V	K	E	S	K	Y	I	I	S	V	C	T	G	S	A	L	L	S	K	A	G	I	L	N	G	K	R	A	T	.	.	T	N	K	R	S
Template Known Secondary structure		S	S	.	.	S									S	.	.	.	.	.	.	.	.	.	.	.	T						T	T																S						T	T								T	T	T	T	T	T	S				.	.			S	T	T
Template Predicted Secondary structure				.	.											.	.	.	.	.	.	.	.	.	.	.																																																	.	.
Template SS confidence
		61	.			.	.	.	.	.	.	.	70	.	.												.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	V	L	E	E	M	G	A	E	H	V	P	C	P	V	D	D	I	V	V	D	E	D	N	K	I	V	T	T	P	A	Y	M	L	A	Q	N	I	A	E	A	A	S	G	I	D	K	L	V	S	R	V	L	V	L	A	E
Query Conservation
Alig confidence																	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	K	W	V	T	E	Q	N	E	D	V	L	W	V	K	.	.	E	A	R	W	V	K	D	G	N	I	Y	T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	S	A	G	I	D	M	T	L	G	F	I	E
Template Known Secondary structure							T	T		T	T	S				S	.	.	S		S					T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.	.														.	.	.	.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions