Job Description P0ABU5 Confidence 60.73% Date Thu Jan 5 11:16:24 GMT 2012 Rank 132 Aligned Residues 91 % Identity 22% Template c3kbqA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein ta0487; PDBTitle: the crystal structure of the protein cina with unknown function from2 thermoplasma acidophilum Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.								.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.
Query Sequence		K	K	I	G	V	I	L	S	G	C	G	V	Y	D	G	S	E	.	.	.	.	.	.	.	I	H	E	A	V	L	T	L	L	A	I	S	R	S	G	A	Q	A	V	C	F	A	P	D	K	Q	Q	V	D	V	I	N	H	L	T	G	E	A	M	T	E	T	R	N	V	L	I	E	A	A	R	I	T	R	G	E
Query Conservation																			.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.					.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	N	A	S	V	I	T	.	.	.	.	.	.	V	G	N	E	I	L	K	G	R	T	V	N	T	N	A	A	F	I	G	N	F	L	T	Y	H	G	Y	Q	V	R	R	G	F	V	V	M	D	D	L	D	E	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									.	.	.	.	.	.							T	T	S	S															T	T											S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.							.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100							.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.
Query Sequence		I	R	P	L	A	Q	A	D	A	A	E	L	D	A	L	I	V	P	G	G	F	G	A	A	K	N	.	.	.	.	.	.	L	S	N	F	A	S	L	G	S	E	C	T	V	D	R	E	L	K	A	L	A	Q	A	M	H	Q
Query Conservation																												.	.	.	.	.	.
Alig confidence		.										.																.	.	.	.	.	.				.	.
Template Conservation		.										.																									.	.
Template Sequence		.	W	A	F	R	V	A	L	E	V	.	S	D	L	V	V	S	S	G	G	L	G	P	T	F	D	D	M	T	V	E	G	F	A	K	.	.	C	I	G	Q	D	L	R	I	D	E	D	A	L	A	M	I	K	K	K	Y	G
Template Known Secondary structure		.										.		S						S			S	S	S	T	T										.	.			T
Template Predicted Secondary structure		.										.																									.	.
Template SS confidence
			51	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions