Job Description P0ABU5 Confidence 99.93% Date Thu Jan 5 11:16:24 GMT 2012 Rank 20 Aligned Residues 167 % Identity 18% Template c3f5dA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein ydea; PDBTitle: crystal structure of a protein of unknown function from2 bacillus subtilis Resolution 2.06 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		M	K	K	I	G	V	I	L	S	G	C	G	V	Y	D	G	S	E	I	H	E	A	V	L	T	L	L	A	I	.	S	R	S	G	A	Q	A	V	C	F	A	P	D	K	Q	Q	V	D	V	I	N	H	L	T	G	E	A	M	T	E	T	R	N	V	L	I	E	A	A	R	I	T	R	G	E	I	R	P	L	A
Query Conservation																															.
Alig confidence										.	.	.	.	.																	.														.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.																															.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	K	A	L	F	L	I	.	.	.	.	.	L	D	Q	Y	A	D	W	E	G	V	Y	L	A	S	A	L	N	Q	R	E	D	W	S	V	H	T	V	S	L	D	.	P	I	V	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	G	F	K	T	S	V	D	Y	I	I	G
Template Known Secondary structure										.	.	.	.	.		S	S	B		T	T	T	S									T	S	T	T								S	S	.	S				B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S						S			T	T
Template Predicted Secondary structure										.	.	.	.	.																															.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10						.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.																			.	.	.	.	50	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		Q	A	D	A	A	E	L	D	A	L	I	V	P	G	G	F	G	A	A	K	N	L	S	N	F	A	S	L	G	S	E	C	T	V	D	R	E	L	K	A	L	A	Q	A	M	H	Q	A	G	K	P	L	G	F	M	C	I	A	P	A	M	L	P	K	I	.	F	D	F	P	L	R	L	T	I	G	T	D	I	D
Query Conservation																																																																			.
Alig confidence				.																			.	.	.	.	.	.	.	.	.	.	.	.	.																																.									.	.
Template Conservation				.																			.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Template Sequence		L	E	.	P	A	N	F	N	L	L	V	X	I	G	G	D	S	W	S	N	D	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	K	L	L	H	F	V	K	T	A	F	Q	K	N	I	P	I	A	A	I	C	G	A	V	D	F	L	A	K	N	G	L	L	N	N	H	S	H	T	.	.	G	N	F	V
Template Known Secondary structure		S	S	.		S			S							B	S						.	.	.	.	.	.	.	.	.	.	.	.	.														T	T							T									T	T	T	T	T	T	S		B		.	.		S		G
Template Predicted Secondary structure				.																			.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Template SS confidence
		59	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.														.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.
		159	160	.	.	.	.	.	.				.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200						.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure										.	.	.																								.	.	.												.	.	.	.	.
Query SS confidence										.	.	.																								.	.	.												.	.	.	.	.
Query Sequence		T	A	E	V	L	E	E	M	.	.	.	G	A	E	H	V	P	C	P	V	D	D	I	V	V	D	E	D	N	K	I	V	T	T	.	.	.	P	A	Y	M	L	A	Q	N	I	A	E	.	.	.	.	.	A	A	S	G	I	D	K	L	V	S	R	V
Query Conservation										.	.	.																								.	.	.												.	.	.	.	.
Alig confidence										.	.	.									.	.	.	.	.											.	.	.												.	.	.	.	.
Template Conservation																					.	.	.	.	.
Template Sequence		Y	L	W	K	D	Y	K	Q	Y	K	P	I	S	S	F	V	E	K	Q	.	.	.	.	.	A	V	R	D	K	N	L	V	T	A	N	G	T	A	P	I	E	F	T	N	L	I	L	E	X	I	D	F	D	T	P	E	N	I	E	K	X	X	Y	X	N
Template Known Secondary structure		G	G	G	T	T		T	T				S	S		B			S	S	.	.	.	.	.					T	T						T	T													T	T		S
Template Predicted Secondary structure																					.	.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.						.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions