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Job DescriptionP0ABU5
Confidence99.93%DateThu Jan 5 11:16:24 GMT 2012
Rank20Aligned Residues167
% Identity18%Templatec3f5dA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:protein ydea; PDBTitle: crystal structure of a protein of unknown function from2 bacillus subtilis
Resolution2.06 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MKKIGVILSGCGVYDGSEIHEAVLTLLAI. SRSGAQAVCFAPDKQQVDVINHLTGEAMTETRNVLIEAARITRGEIRPLA
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Template Sequence  LKKALFLI. . . . . LDQYADWEGVYLASALNQREDWSVHTVSLD. PIVSS. . . . . . . . . . . . . . . . . . IGGFKTSVDYIIG
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SSB
TTTSTSTTSS.SB..................TTS

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Query Sequence  QADAAELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQAGKPLGFMCIAPAMLPKI. FDFPLRLTIGTDID
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Template Sequence  LE. PANFNLLVXIGGDSWSND. . . . . . . . . . . . . NKKLLHFVKTAFQKNIPIAAICGAVDFLAKNGLLNNHSHT. . GNFV
Template Known Secondary structure  SS.
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   5960 .........70........ .80.........90.........100.........110........ .120..
 
   159160...... ...170.........180......... 190.........200 .........210..
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Query Sequence  TAEVLEEM. . . GAEHVPCPVDDIVVDEDNKIVTT. . . PAYMLAQNIAE. . . . . AASGIDKLVSRV
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Template Sequence  YLWKDYKQYKPISSFVEKQ. . . . . AVRDKNLVTANGTAPIEFTNLILEXIDFDTPENIEKXXYXN
Template Known Secondary structure  GGGTT
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   123......130.........140. ........150.........160.........170.........180..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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