Job Description P0ABU5 Confidence 99.87% Date Thu Jan 5 11:16:24 GMT 2012 Rank 25 Aligned Residues 159 % Identity 21% Template c3bhnA_ PDB info PDB header:unknown function Chain: A: PDB Molecule:thij/pfpi domain protein; PDBTitle: crystal structure of a dj-1/pfpi-like protein (shew_2856) from2 shewanella loihica pv-4 at 1.76 a resolution Resolution 1.76 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		K	I	G	V	I	L	S	G	C	G	V	Y	D	G	S	E	I	H	E	A	V	L	T	L	L	A	I	S	R	S	G	A	Q	A	V	C	.	F	A	P	D	K	Q	Q	V	D	V	I	N	H	L	T	G	E	A	M	T	E	T	R	N	V	L	I	E	A	A	R	I	T	R	G	E	I	R	P	L	A	Q	A
Query Conservation																																						.
Alig confidence								.	.	.	.	.																										.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation								.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Sequence		K	V	G	I	V	L	.	.	.	.	.	F	D	D	F	T	D	V	D	F	F	L	X	N	D	L	L	G	R	T	S	D	S	W	T	V	R	I	L	G	T	K	P	E	H	H	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	G	X	T	V	K	T	D	G	H	V	S	E	.
Template Known Secondary structure								.	.	.	.	.		T	T	B													T	T		S	S	S								S	S	S				B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T							S			G	G	G	.
Template Predicted Secondary structure								.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template SS confidence
		3	.	.	.	.	.						.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.																			.	.	.	.	.	50	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		D	A	A	E	L	D	A	L	I	V	P	G	G	F	G	A	A	K	N	L	S	N	F	A	S	L	G	S	E	C	T	V	D	R	E	L	K	A	L	A	Q	A	M	H	Q	A	G	K	P	L	G	F	M	C	I	A	P	A	M	L	P	K	I	.	F	D	F	P	L	R	L	T	I	G	T	D	I	D	T	A
Query Conservation																																																																	.
Alig confidence		.																					.	.	.	.	.	.	.	.	.	.	.																																.									.	.
Template Conservation		.																					.	.	.	.	.	.	.	.	.	.	.																																									.	.
Template Sequence		.	V	K	E	Q	D	V	V	L	I	T	S	G	Y	R	G	I	P	A	A	L	.	.	.	.	.	.	.	.	.	.	.	Q	D	E	N	F	X	S	A	L	K	L	D	P	S	R	Q	L	I	G	S	I	C	A	G	S	F	V	L	H	E	L	G	L	L	K	G	K	K	L	T	.	.	T	N	P	D	A	K
Template Known Secondary structure		.	G	G	G		S								T	T							.	.	.	.	.	.	.	.	.	.	.	T												T	T	T							T	T								T	T	T	T	T	T					.	.			G	G	G
Template Predicted Secondary structure		.																					.	.	.	.	.	.	.	.	.	.	.																																									.	.
Template SS confidence
			59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.												.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	L	E	E	M	G	A	E	H	V	P	C	P	V	D	D	I	V	V	D	E	D	N	K	I	V	T	T	P	A	Y	M	L	A	Q	N	I	A	E	A	A	S	G	I	D	K	L	V	S	R	V	L	V	L	A	E
Query Conservation
Alig confidence																.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	L	Q	G	X	G	G	D	V	Q	D	L	P	.	.	.	.	.	L	V	I	E	G	N	I	A	T	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	C	L	S	L	L	Y	L	V	G	W	L	A	E
Template Known Secondary structure							T	T					S	S	S	.	.	.	.	.					T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	G	G
Template Predicted Secondary structure																.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.						.	140	.	.	.	.	.	.	.	.	.														150	.	.	.	.	.	.	.	.	.	160	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions