Job Description P0ABU5 Confidence 65.68% Date Thu Jan 5 11:16:24 GMT 2012 Rank 124 Aligned Residues 119 % Identity 17% Template c2q4oA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein at2g37210/t2n18.3; PDBTitle: ensemble refinement of the crystal structure of a lysine2 decarboxylase-like protein from arabidopsis thaliana gene at2g37210 Resolution 1.95 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		M	K	K	I	G	V	I	L	S	G	C	G	V	Y	D	G	S	E	I	H	E	A	V	L	T	L	L	A	I	S	R	S	G	A	Q	A	V	C	F	A	P	D	K	Q	Q	V	D	V	I	N	H	L	T	G	E	A	M	T	E	T	R	N	V	L	I	E	A	A	R	I	T	.	R	G	E	I	R	P	L	A
Query Conservation																																																																									.
Alig confidence																																																																									.
Template Conservation
Template Sequence		F	R	R	I	C	V	F	C	G	S	S	Q	G	K	K	S	S	Y	Q	D	A	A	V	D	L	G	N	E	L	V	S	R	N	I	D	L	V	Y	G	G	G	S	I	G	L	X	G	L	V	S	Q	A	V	H	D	G	G	R	H	V	I	G	I	I	P	K	T	L	X	V	G	E	V	R	A	V	A	D	X	H
Template Known Secondary structure			S								S	S			S	S																	T	T									S	S													T	T									T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		80						.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure			.	.	.	.	.
Query SS confidence			.	.	.	.	.
Query Sequence		Q	.	.	.	.	.	A	D	A	A	E	L	D	A	L	I	V	P	G	G	F	G	A	A	K	N	L	S	N	F	A	S	L	G	S	E	C	T	V	D	R	E	L	K	A	L	A	Q	A	M	H	Q	A	G	K	P	L	G	F	M
Query Conservation			.	.	.	.	.
Alig confidence			.	.	.	.	.						.																		.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation													.																		.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Sequence		Q	R	K	A	E	X	A	K	H	S	D	.	A	F	I	A	L	P	G	G	Y	G	T	L	E	E	L	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	T	W	A	Q	L	G	.	I	H	D	K	P	V	G	L	L
Template Known Secondary structure										T		S	.						S												.	.	.	.	.	.	.	.	.	.	.	.	.								T	.	S
Template Predicted Secondary structure													.																		.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.														.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions