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Job DescriptionP0ABU5
Confidence41.13%DateThu Jan 5 11:16:24 GMT 2012
Rank173Aligned Residues53
% Identity23%Templatec2dlnA_
PDB info PDB header:ligase(peptidoglycan synthesis)Chain: A: PDB Molecule:d-alanine--d-alanine ligase; PDBTitle: vancomycin resistance: structure of d-alanine:d-alanine2 ligase at 2.3 angstroms resolution
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10........ .20.. .......30.........40.........50.........60.........70....
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Query Sequence  MKKIGVILSGCGVYDGSE. IHEA. . . . . VLTLLAISRSGAQAVCFAPDKQQVDVINHLTGEAMTETRNVLIEAARITRGE
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Template Sequence  TDKIAVLL. . . . . . GGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEVD. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   2....... 10.........20.........30.........40......
 
   75....80.........90.
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Query Sequence  IRPLAQADAAELDALIV
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Template Sequence  . . . VTQLKSMGFQKVFI
Template Known Secondary structure  ...GGGSGGGT
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   47..50.........60
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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