Job Description P0ABU5 Confidence 28.87% Date Thu Jan 5 11:16:24 GMT 2012 Rank 217 Aligned Residues 116 % Identity 18% Template c1vmeB_ PDB info PDB header:electron transport Chain: B: PDB Molecule:flavoprotein; PDBTitle: crystal structure of flavoprotein (tm0755) from thermotoga maritima at2 1.80 a resolution Resolution 1.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	I	G	V	I	L	S	G	C	G	V	Y	D	G	S	E	I	H	E	A	V	L	T	L	L	A	I	S	R	S	G	A	Q	A	V	C	F	A	P	D	K	Q	Q	V	D	V	I	N	H	L	T	G	E	A	M	T	E	T	R	N	V	L	I	E	A	A	R	I	T	R	G	E	I	R	P	L	A	Q	A
Query Conservation
Alig confidence											.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	K	V	T	V	I	Y	D	S	.	.	.	X	Y	G	F	V	E	N	V	X	K	K	A	I	D	S	L	K	E	K	G	F	T	P	V	V	Y	K	F	S	D	E	E	R	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	E	I
Template Known Secondary structure		T									.	.	.	S	S	S																T	T										S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.				.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.																														.	.	300	.
				82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	D	A	A	E	L	D	A	L	I	V	P	G	G	F	G	A	A	K	N	L	S	N	F	A	S	L	G	S	E	C	T	V	D	R	E	L	K	A	L	A	Q	A	M	H	Q	A	G	K	P	L	G	F	M	C	I	A	P	A	M	L	P	K	I	F	D	F	P	L	R	L	T	I	G	T	D	I	D	T
Query Conservation		.	.
Alig confidence		.	.																							.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.						.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.						.	.
Template Sequence		L	K	D	I	P	D	S	E	A	L	I	F	G	V	S	T	Y	E	A	E	I	H	P	L	.	.	.	.	.	.	.	.	.	.	X	R	F	T	L	L	E	I	I	D	K	A	N	Y	E	K	P	V	L	V	F	G	.	.	.	.	.	.	.	.	.	.	V	H	G	W	A	.	.	P	S	A	E	R	T	A
Template Known Secondary structure					S	T	T		S										T	T						.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.						.	.		T	T	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.						.	.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.											.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.											.	.	350	.	.			.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	V	L	E	E	M	G	A	E	H	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	L	L	K	E	T	K	F	R	I	L
Template Known Secondary structure							T	S	S
Template Predicted Secondary structure
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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