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Job DescriptionP04951
Confidence99.90%DateThu Jan 5 10:58:26 GMT 2012
Rank51Aligned Residues217
% Identity21%Templated2dpwa1
SCOP infoNucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases TTHA0179-like
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MSFVVIIPARYASTRL. . . . . PGKPLVDINGKPMIVHVLERARESGAERIIVATDHEDVARAVEAAGGEVCMTRADHQSG
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Template Sequence  XRPSAIVLAGGKEAWAERFGVGSKALVPYRGRPXVEWVLEALYAAGLSPVYVGENP. . . . . . . . . . . . GLVPAPALTLPD
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B
SGGGTTT
SBGGGSTTTTT
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   1........10.........20.........30.........40.........50...... ...60........
 
   76...80.........90.........100.........110.........120.........130.........140.........150..
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Query Sequence  TERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYA. . .
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Template Sequence  RGGLLENLEQALEHVEGRVLVATGDIPHLTEEAVRFVLDKA. . PEAALVYPIVPKEAVEARFPRTKRTYARLREGTFTGG
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STT
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   6970.........80.........90.........100......... 110.........120.........130.........140......
 
   153......160.........170.........180.........190.........200.........210.........220........
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Query Sequence  . . . . LYFSRATIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQE
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Template Sequence  NLLLLDKSLFRKALPLARRVVALRKRPLALARLVGWDVLLKLLL. . . . . . . . GRLSLAEVEARAQRI. LGVEARALVTPY
Template Known Secondary structure  STTTTTT

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   147..150.........160.........170.........180.........190 .........200..... ....210.......
 
   229 230.........240
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Query Sequence  V. PGTGVDTPEDL
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Template Sequence  PEVGVDVDREEDL
Template Known Secondary structure  GGGT



S
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   218.220.........230
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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