Job Description P04951 Confidence 99.96% Date Thu Jan 5 10:58:26 GMT 2012 Rank 24 Aligned Residues 211 % Identity 18% Template d1vpaa_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.67

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																				.	.	.																								.																						.
Query SS confidence																				.	.	.																								.																						.
Query Sequence		M	S	F	V	V	I	I	P	A	R	Y	A	S	T	R	L	P	G	.	.	.	K	P	L	V	D	I	N	G	K	P	M	I	V	H	V	L	E	R	A	R	E	S	G	.	A	E	R	I	I	V	A	T	D	H	E	D	V	A	R	A	V	E	A	A	G	.	G	E	V	C	M	T	R	A	D	H	Q	S	G
Query Conservation																				.	.	.																								.																						.
Alig confidence					.															.	.	.																								.																						.
Template Conservation					.
Template Sequence		M	N	V	.	A	I	L	L	A	A	G	K	G	E	R	M	S	E	N	V	P	K	Q	F	L	E	I	E	G	R	M	L	F	E	Y	P	L	S	T	F	L	K	S	E	A	I	D	G	V	V	I	V	T	R	R	E	W	F	E	V	V	E	K	R	V	F	H	E	K	V	L	G	I	V	E	G	G	D	T	R
Template Known Secondary structure					.										G	G	G			S	S		G	G	G				T	T			T	T											T	T		S								G	G	G						T	T				T	T									S	S
Template Predicted Secondary structure					.
Template SS confidence
		1	.	.		.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	R	L	A	E	V	V	E	K	C	A	F	S	D	D	T	V	I	V	N	V	Q	G	D	E	P	M	I	P	A	T	I	I	R	Q	V	A	D	N	L	A	Q	R	Q	V	G	M	A	T	L	A	V	P	I	H	N	A	E	E	A	F	N	P	N	A	V	K	V	V	L	D	A	E	G	Y	A	L	Y	F
Query Conservation
Alig confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	Q	S	V	R	S	A	L	E	F	L	E	K	F	S	P	S	Y	V	L	V	H	D	S	A	R	P	F	L	R	K	K	H	V	S	E	V	L	R	R	A	R	E	T	G	A	A	T	L	A	L	K	N	S	D	A	.	.	.	.	.	.	.	.	.	.	.	.	L	V	R	V	E	N	D	R	I	E	Y	I
Template Known Secondary structure													G	G	G			S							T	T	S																			S										S		.	.	.	.	.	.	.	.	.	.	.	.						T	T
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.													.	.	.	.	140	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	A	T	I	P	W	D	R	D	R	F	A	E	G	L	E	T	V	G	D	N	F	L	R	H	L	G	I	Y	G	Y	R	A	G	F	I	R	R	Y	V	N	W	Q	P	S	P	L	E	H	I	E	M	L	E	Q	L	R	V	L	W	Y	G	E	K	I	H	V	A	V	A	Q	E	V	P	G	T	G	V	D
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.																.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.																.
Template Sequence		P	R	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Y	R	I	L	T	P	Q	A	F	S	Y	E	I	L	K	K	A	H	E	N	G	G	E	W	A	D	D	T	E	P	V	.	.	.	.	.	Q	K	L	G	V	K	I	A	L	V	E	G	D	P	L	.	C	F	K	V	T
Template Known Secondary structure				T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				T	T					S	S	S					.	.	.	.	.		T	T	T										G	G	.	G
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.																.
Template SS confidence
		148	.	150	.																			.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.						.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	E	D	L	E	R	V	R	A	E	M	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	K	E	D	L	E	L	A	R	I	I	A	R
Template Known Secondary structure		S	T	T
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions