Job Description P04951 Confidence 98.27% Date Thu Jan 5 10:58:26 GMT 2012 Rank 62 Aligned Residues 188 % Identity 17% Template d1vm8a_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases UDP-glucose pyrophosphorylase Resolution 2.50

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.				.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.												.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																		.	.	.									.	.	.																	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Query SS confidence																		.	.	.									.	.	.																	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Query Sequence		S	F	V	V	I	I	P	A	R	Y	A	S	T	R	L	P	.	.	.	G	K	P	L	V	D	I	N	.	.	.	G	K	P	M	I	V	H	V	L	E	R	A	R	E	S	G	.	.	.	.	.	.	.	.	.	.	.	A	E	R	I	I	V	A	T	D	H	.	.	.	E	D	V	A	R	A	V	E	A	A
Query Conservation																		.	.	.									.	.	.																	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Alig confidence																		.	.	.									.	.	.																	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation
Template Sequence		K	V	A	V	L	L	L	A	G	G	Q	G	T	R	L	G	V	S	Y	P	K	G	X	Y	D	V	G	L	P	S	H	K	T	L	F	Q	I	Q	A	E	R	I	L	K	L	Q	Q	L	A	E	K	H	H	G	N	K	C	T	I	P	W	Y	I	X	T	S	G	R	T	X	E	S	T	K	E	F	F	T	K	H
Template Known Secondary structure											S	B		T	T	T	T		S	S	B	G	G	G		B				T	T			B																					S	S												T	T	T											T
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		62	.							.	.	.	.	.																						.	70	.	.	.	.	.	.	.	.	.	80	.	.							.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Query Sequence		G	G	.	.	.	.	.	.	E	V	C	M	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	D	H	Q	S	G	T	E	R	L	A	E	V	.	.	.	.	.	.	V	E	K	C	A	F	S	D	D	T	V	I	V	N	V	Q	G	D	E	P	M	I	P	A	T	I
Query Conservation				.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation
Template Sequence		K	F	F	G	L	K	K	E	N	V	V	F	F	Q	Q	G	X	L	P	A	X	S	F	D	G	K	I	I	L	E	E	K	N	K	V	S	X	A	P	D	G	N	G	G	L	Y	R	A	L	A	A	Q	N	I	V	E	D	X	E	Q	R	G	I	C	S	I	H	V	Y	C	V	D	N	I	L	V	K	V	A	D
Template Known Secondary structure		G	G	G	G	S		G	G	G														T	T	S		B					T	T									T	T									T	T									T									T	T	B	T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	Q	V	A	D	N	L	A	Q	R	Q	V	G	M	A	T	L	A	V	P	I	H	N	A	E	E	A	F	N	P	N	A	V	K	V	V	L	D	A	E	G	Y	A	L	Y	F	S	R	A	T	I	P	W	D	R	D	R	F	A	E	G	L	E	T	V	G	D	N	F	L	R	H	L	G	I	Y	G	Y	R
Query Conservation
Alig confidence			.																												.	.	.	.	.																													.
Template Conservation			.																												.	.	.	.	.																													.
Template Sequence		P	.	R	F	I	G	F	C	I	Q	K	G	A	D	C	G	A	K	V	V	E	K	T	N	P	T	E	P	V	.	.	.	.	.	G	V	V	C	R	V	D	G	V	Y	Q	V	V	E	Y	S	E	I	S	L	A	T	A	Q	R	R	S	S	.	D	G	R	L	L	F	N	A	G	N	I	A	N	H	F	F	T
Template Known Secondary structure			.									T	T		S										S	T	T				.	.	.	.	.							T	T							T	T	T	S								B		T	.	T	S	S	B	S	S
Template Predicted Secondary structure			.																												.	.	.	.	.																													.
Template SS confidence
		262		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.						290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		189	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	F	I	R	R	Y	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	P	F	L	K	D	V	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		335	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions