Job Description P04951 Confidence 99.96% Date Thu Jan 5 10:58:26 GMT 2012 Rank 23 Aligned Residues 215 % Identity 16% Template d1tzfa_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.10

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60
Predicted Secondary structure																																																					.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	F	V	V	I	I	P	A	R	Y	A	S	T	R	L	P	G	K	P	L	V	D	I	N	G	K	P	M	I	V	H	V	L	E	R	A	R	E	S	G	A	E	R	I	I	V	A	T	D	H	.	.	E	D	V	A	R	A	V	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																					.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.																																			.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.
Template Sequence		M	A	S	K	A	V	I	L	A	G	G	L	G	V	K	.	.	P	K	P	M	V	E	I	G	G	K	P	I	L	W	H	I	M	K	M	Y	S	V	H	G	I	K	D	F	I	I	C	C	G	Y	K	G	Y	V	I	K	E	Y	F	A	N	Y	F	L	H	M	S	D	V	T	F	H	M	A	E	N	R	M	E
Template Known Secondary structure												S					.	.		G	G	G				T	T														T	T										T	T										T						S						G	G	G	T
Template Predicted Secondary structure																	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.			.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
								61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	A	G	G	E	V	C	M	T	R	A	D	H	Q	S	G	T	E	R	L	A	E	V	V	E	K	C	A	F	S	D	D	T	V	I	V	N	V	Q	G	D	E	P	M	I	P	A	T	I	I	R	Q	V	A	D	N	L	A	Q	R	Q	V	G	M	A	T	L	A	V	P	I	H	N	A	E
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																				.	.	.
Template Conservation																																											.	.	.
Template Sequence		V	H	H	K	R	V	E	P	W	N	V	T	L	V	D	T	G	D	S	S	M	T	G	G	R	L	K	R	V	A	E	Y	V	K	D	D	E	A	F	L	F	.	.	.	T	Y	G	D	G	V	A	D	L	D	I	K	A	T	I	D	F	H	K	A	H	G	K	K	A	T	L	T	A	T	F	P	P	G	R	F
Template Known Secondary structure			T	T															S	S										T	G	G	G	T	T	T	S	S					.	.	.			T	T																				S												S
Template Predicted Secondary structure																																											.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	F	N	P	N	A	V	K	V	V	L	D	A	E	G	Y	A	L	Y	F	S	R	A	T	I	P	W	D	R	D	R	F	A	E	G	L	E	T	V	G	D	N	F	L	R	H	L	G	I	Y	G	Y	R	A	G	F	I	R	R	Y	V	N	W	Q	P	S	P	L	E	H	I	E	M	L	E	Q	L	R	V
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Sequence		G	.	.	.	.	.	.	.	.	A	L	D	I	Q	A	G	Q	V	R	S	F	Q	E	K	P	K	G	D	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	I	N	G	G	F	F	V	L	N	P	S	V	I	D	L	I	D	N	.	.	.	.	.	D	A	T	T	W	E	Q	E	P	L	M	T
Template Known Secondary structure			.	.	.	.	.	.	.	.						T	T								S		S			S		.	.	.	.	.	.	.	.	.	.	.	.	.	.											G	G	G	G	G	G			S	.	.	.	.	.	T	T			T	T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template SS confidence
		164									.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.															.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.						.	.	.	.	.	210	.	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	W	Y	G	E	K	I	H	V	A	V	A	Q	E	V	P	G	T	G	V	D	T	P	E	D	L	E	R	V	R	A	E	M	R
Query Conservation
Alig confidence																	.
Template Conservation																	.
Template Sequence		L	A	Q	Q	G	E	L	M	A	F	E	H	P	G	F	.	W	Q	P	M	D	T	L	R	D	K	V	Y	L	E	G	L	W	E
Template Known Secondary structure					T	T									S		.						S
Template Predicted Secondary structure																	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions