Return to main results Retrieve Phyre Job Id

Job DescriptionP04951
Confidence99.97%DateThu Jan 5 10:58:26 GMT 2012
Rank20Aligned Residues216
% Identity17%Templated1qwja_
SCOP infoNucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40. ........50.........60.........70.........80
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Query Sequence  SFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESG. AERIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLA
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Template Sequence  HLAALVLARGGSKGIPLKNIKRLAGVPLIGWVLRAALDAGVFQSVWVSTDHDEIENVAKQFGAQVHRRSSETSKDSSTSL
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S

SSSS
TTTSTTT

SS
TT


GGGSSTT

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   42.......50.........60.........70.........80.........90.........100.........110.........120.
 
   81........ 90.........100.........110.........120.........130.........140.........150........
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Query Sequence  EVVEKCAFS. . DDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRA
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Template Sequence  DAIVEFLNYHNEVDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSVVRRHQFRWSE. . . . . . IQKGVREVTEPLNLN
Template Known Secondary structure  TT
TT
S
TT
TT

SS

S



B

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SSTT



BSSSB
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   122.......130.........140.........150.........160.........170.........180 .........190.....
 
   159160.........170.........180.........190.........200.........210.........220.........230........
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Query Sequence  TIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPE
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Template Sequence  P. . . . . . AKRPRRQDWDGELYENGSFYFAKRHLIEMGYL. . . . . . . . . . . . . . . . . . . QGGKMAYYEMRAEHSVDIDVDI
Template Known Secondary structure  T......TB


TTTS

TT
S...................S
SS

GGG



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   196 ...200.........210.........220........ .230.........240.........250
 
   239240........
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Query Sequence  DLERVRAEMR
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Template Sequence  DWPIAEQRVL
Template Known Secondary structure  S
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   251........260
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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