Job Description P04951 Confidence 99.97% Date Thu Jan 5 10:58:26 GMT 2012 Rank 18 Aligned Residues 225 % Identity 18% Template d1mc3a_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases glucose-1-phosphate thymidylyltransferase Resolution 2.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.							.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.							.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																		.	.	.	.	.	.																																		.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.																																		.	.	.	.	.	.
Query Sequence		F	V	V	I	I	P	A	R	Y	A	S	T	R	L	P	G	.	.	.	.	.	.	K	P	L	V	D	I	N	G	K	P	M	I	V	H	V	L	E	R	A	R	E	S	G	A	E	R	I	I	V	A	T	D	H	.	.	.	.	.	.	E	D	V	A	R	A	V	E	A	A	G	G	E	V	C	M	T	R	A
Query Conservation																		.	.	.	.	.	.																																		.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.																																		.	.	.	.	.	.
Template Conservation
Template Sequence		X	K	G	I	I	L	A	G	G	S	G	T	R	L	H	P	I	T	R	G	V	S	K	Q	L	L	P	I	Y	D	K	P	X	I	Y	Y	P	L	S	V	L	X	L	A	G	I	R	E	I	L	I	I	T	T	P	E	D	K	G	Y	F	Q	R	L	L	G	D	G	S	E	F	G	I	Q	L	E	Y	A	E	Q
Template Known Secondary structure													G	G	G					T	T	S		G	G	G	S			T	T			T	T										T	T										T	T	T									T	T	S	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		D	H	Q	S	G	T	E	R	L	A	E	V	V	E	K	C	A	F	S	D	D	T	V	I	V	N	V	Q	G	D	E	P	M	I	P	A	T	I	I	R	Q	V	A	D	N	L	A	Q	R	Q	V	G	M	A	T	L	A	V	P	I	H	N	A	E	E	A	F	N	P	N	A	V	K	V	V	L	D	A	E	G
Query Conservation
Alig confidence																			.	.																	.																																.	.	.	.	.
Template Conservation																			.	.																	.																																.	.	.	.	.
Template Sequence		P	S	P	D	G	L	A	Q	A	F	I	I	G	E	T	F	L	.	.	N	G	E	P	S	C	L	V	L	G	D	N	I	F	F	G	.	Q	G	F	S	P	K	L	R	H	V	A	A	R	T	E	G	A	T	V	F	G	Y	Q	V	X	D	P	E	R	F	G	.	.	.	.	.	V	V	E	F	D	D	N	F
Template Known Secondary structure		S	S				S	T						T					.	.	T	T	S							T	T						.	S	S									T	T			S	S									S			S	S	S	B	.	.	.	.	.	B					T	T
Template Predicted Secondary structure																			.	.																	.																																.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		Y	A	L	Y	F	S	R	A	T	I	P	W	D	R	D	R	F	A	E	G	L	E	T	V	G	D	N	F	L	R	H	L	G	I	Y	G	Y	R	A	G	F	I	R	R	Y	V	N	W	Q	P	S	P	L	E	H	I	E	M	L	E	Q	L	R	.	V	L	W	Y	G	E	K	I	H	V	A	V	A	Q	E	V
Query Conservation																																																																	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.																																										.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	I	S	L	E	E	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Q	P	K	S	N	W	A	V	T	G	L	Y	F	Y	D	S	K	V	V	E	Y	A	K	Q	V	K	P	S	E	R	G	E	L	E	I	T	S	I	N	Q	X	Y	L	E	A	G	N	L	T	V	E	L	L	G	R	G	F
Template Known Secondary structure								B	S		.	.	.	.	.	.	.	.	.	.	.	.	.	S	S		S		S											T								S					S	S	S	S													T	T									T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.														.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	T	G	V	D	T	P	E	D	L	E	R	V	R	A	E	M	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	W	L	D	T	G	T	H	D	S	L	I	E	A	S	T	F	V	Q
Template Known Secondary structure								S
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions