Return to main results Retrieve Phyre Job Id

Job DescriptionP04951
Confidence100.00%DateThu Jan 5 10:58:26 GMT 2012
Rank9Aligned Residues225
% Identity20%Templated1fxoa_
SCOP infoNucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases glucose-1-phosphate thymidylyltransferase
Resolution1.66

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10........ .20.........30.........40.........50. ........60 .........
Predicted Secondary structure 









......








......



Query SS confidence 
















. . . . . .
































. . .








. . .








Query Sequence  SFVVIIPARYASTRLPG. . . . . . KPLVDINGKPMIVHVLERARESGAERIIVATDH. . . EDVARAVEA. . . AGGEVCMTR
Query Conservation      

 
 
 


   ......
 
  
 




   
  
   

  



   ...  
      ...         
Alig confidence 
















......
































...








...








Template Conservation    







 



 


   

 



 




   
  
   

  
 

        
                  
Template Sequence  KRKGIILAGGSGTRLHPATLAISKQLLPVYDKPMIYYPLSTLMLAGIREILIISTPQDTPRFQQLLGDGSNWGLDLQYAV
Template Known Secondary structure 





TTTTTS
GGGSTTTTTT


TTTTTSGGGT
Template Predicted Secondary structure 




































Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   70.........80.........90.........100.........110.........120.........130.........140.........
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  ADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAE
Query Conservation                                         
   
                                    
Alig confidence 


















..
















.




























.....






Template Conservation       


 

  
   
 ..     
   
       .    
          

           
..... 
  
  
Template Sequence  QPSPDGLAQAFLIGESFIG. . NDLSALVLGDNLYYGHD. FHELLGSASQRQTGASVFAYHVLDPERYG. . . . . VVEFDQG
Template Known Secondary structure 
SS


GGGTT..TSTT
TT.T

SS
S
GGGS.....
TT
Template Predicted Secondary structure 






..








.










.....


Template SS confidence 















































































   82.......90.........100 .........110....... ..120.........130.........140...... ...150...
 
   150.........160.........170.........180.........190.........200.........210... ......220........
Predicted Secondary structure 

























.






Query SS confidence 































































.














Query Sequence  GYALYFSRATIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLR. VLWYGEKIHVAVAQE
Query Conservation 
                                


      
                   
 . 
  
  
       
Alig confidence 









.............








































.














Template Conservation 
 
    


.............          


     

  
         
    
                   
Template Sequence  GKAISLEEKP. . . . . . . . . . . . . LEPKSNYAVTGLYFYDQQVVDIARDLKPSPRGELEITDVNRAYLERGQLSVEIMGRG
Template Known Secondary structure  S
S
.............SS
SSS
TT



TTSS

TT


TT
Template Predicted Secondary structure 



.............























Template SS confidence 















































































   154.....160... ......170.........180.........190.........200.........210.........220
 
   229230.........240.......
Predicted Secondary structure 







Query SS confidence 


















Query Sequence  VPGTGVDTPEDLERVRAEM
Query Conservation       






  

  
Alig confidence 


















Template Conservation    
 

 
  
   
    
Template Sequence  YAWLDTGTHDSLLEAGQFI
Template Known Secondary structure  S

S
Template Predicted Secondary structure 



Template SS confidence 


















   221........230.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions