Return to main results Retrieve Phyre Job Id

Job DescriptionP04951
Confidence99.98%DateThu Jan 5 10:58:26 GMT 2012
Rank17Aligned Residues217
% Identity19%Templated1eyra_
SCOP infoNucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40. ........50.........60.........70 .......
Predicted Secondary structure 














.








...





Query SS confidence 







































.




























. . .






Query Sequence  SFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESG. AERIIVATDHEDVARAVEAAGGEVCMTRA. . . DHQSGTE
Query Conservation      

 
 
 


   
 
  
 




   
  
   
.
  



     
                ...       
Alig confidence 







































.




























...






Template Conservation     




 
 
 

  
 
  
 




   
  
        


                                 
Template Sequence  QNIAVILARQNSKGLPLKNLRKXNGISLLGHTINAAISSKCFDRIIVSTDGGLIAEEAKNFGVEVVLRPAELASDTASSI
Template Known Secondary structure 

S

SSSTTGGG
TTT

SS
TT


STT

Template Predicted Secondary structure 



































Template SS confidence 















































































   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   78.80.........90.........100.........110.........120.........130.........140.........150.......
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  RLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSR
Query Conservation                                 
   
                                    
       
Alig confidence 



























































.....














Template Conservation                  

    
 
                                   .....               
Template Sequence  SGVIHALETIGSNSGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVSACPXEHHPLKT. . . . . LLQINNGEYAPXRHL
Template Known Secondary structure  T

S

TT
TT

TT

TTT



SS
TTS
.....
SSS
SS
G
Template Predicted Secondary structure 
































.....




Template SS confidence 















































































   84.....90.........100.........110.........120.........130.........140... ......150........
 
   158.160.........170.........180.........190.........200.........210.........220.........230.......
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  ATIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTP
Query Conservation                           


      
                   
  
  
  
            



Alig confidence 
.......
































..................




















Template Conservation   .......                          
      ..................                



 
Template Sequence  S. . . . . . . DLEQPRQQLPQAFRPNGAIYINDTASLIANNCF. . . . . . . . . . . . . . . . . . FIAPTKLYIXSHQDSIDIDTE
Template Known Secondary structure  G.......GGTS
GGGS


TSS..................

SS


TTTT



S
Template Predicted Secondary structure 
.......










..................










Template SS confidence 















































































   159 160.........170.........180.........190.. .......200.........210...
 
   238.240........
Predicted Secondary structure 
Query SS confidence 










Query Sequence  EDLERVRAEMR
Query Conservation 


  

  

Alig confidence 










Template Conservation 


  

 

 
Template Sequence  LDLQQAENILN
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 










   214.....220....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions