Job Description P04951 Confidence 99.98% Date Thu Jan 5 10:58:26 GMT 2012 Rank 15 Aligned Residues 244 % Identity 12% Template c3pnnA_ PDB info PDB header:transferase Chain: A: PDB Molecule:conserved domain protein; PDBTitle: the crystal structure of a glycosyltransferase from porphyromonas2 gingivalis w83 Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																			.	.	.																																		.	.	.								.	.	.
Query SS confidence																			.	.	.																																		.	.	.								.	.	.
Query Sequence		S	F	V	V	I	I	P	A	R	Y	A	S	T	R	L	P	G	.	.	.	K	P	L	V	D	I	N	G	K	P	M	I	V	H	V	L	E	R	A	R	E	S	G	A	E	R	I	I	V	A	T	D	H	.	.	.	E	D	V	A	R	A	V	.	.	.	E	A	A	G	G	E	V	C	M	T	R	A	D	H
Query Conservation																			.	.	.																																		.	.	.								.	.	.
Alig confidence																			.	.	.																																		.	.	.								.	.	.
Template Conservation
Template Sequence		K	P	T	L	F	V	L	A	A	G	X	G	S	R	Y	G	S	L	K	Q	L	D	G	I	G	P	G	G	D	T	I	X	D	Y	S	V	Y	D	A	I	R	A	G	F	G	R	L	V	F	V	I	R	H	S	F	E	K	E	F	R	E	K	I	L	T	K	Y	E	G	R	I	P	V	E	L	V	F	Q	E	L
Template Known Secondary structure										T	T		B		T	T	S	S	B							S	T	T	S															T										G	G	G								T					T	T	T	S									T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		73	.	.	.	.	.													.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.					120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.
Query Sequence		Q	S	G	T	E	R	.	.	.	.	.	.	.	.	.	.	.	.	L	A	E	V	V	E	K	C	A	F	S	D	D	T	V	I	V	N	V	Q	G	D	E	P	M	I	P	A	T	I	I	R	Q	V	A	D	N	L	A	Q	R	.	.	.	.	Q	V	G	M	A	T	L	A	V	P	I	H	N	A	E	E	A
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.																							.																			.	.	.	.
Template Conservation																																										.
Template Sequence		D	R	L	P	E	G	F	S	C	P	E	G	R	E	K	P	W	G	T	N	H	A	V	L	X	G	R	D	A	I	R	E	P	F	A	V	I	N	A	D	.	D	F	Y	G	R	N	G	F	E	V	L	A	R	K	L	X	T	L	E	G	K	Q	G	E	Y	C	X	V	G	Y	R	V	G	N	T	L	S	E	S
Template Known Secondary structure		T				T	T					T	T			S										T	T	T	T	T			S							S	S	.		B															T	T	T	T		S	S									G	G	G	S		B	T	T
Template Predicted Secondary structure																																										.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.							.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.												.	.
Predicted Secondary structure																																								.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	N	P	N	A	V	K	V	V	L	D	A	E	G	Y	A	L	Y	F	S	R	A	T	I	P	W	D	R	D	R	F	A	E	G	L	E	T	V	.	.	.	.	.	.	G	D	N	F	L	R	H	L	G	I	Y	G	Y	R	A	G	F	I	R	R	Y	V	N	.	.	.	.	.	.	.	.	.	.	.	W	Q
Query Conservation																																								.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	G	V	S	R	G	V	C	Q	V	D	E	K	H	L	L	T	G	V	V	E	R	T	G	I	E	R	T	D	G	T	I	S	F	R	D	E	T	G	K	I	C	T	L	A	E	D	A	P	V	S	X	N	X	W	G	F	T	P	D	Y	F	D	Y	S	E	E	L	F	I	N	F	L	N	A	H	G	Q	E	P
Template Known Secondary structure		B											T	T	S	B														T	T							T	T	S							T	T												T																		T	T		S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	P	L	E	H	I	E	M	L	E	Q	L	R	V	L	W	Y	G	E	K	I	H	V	A	V	A	Q	E	V	P	G	T	G	V	D	T	P	E	D	L	E	R	V	R	A	E	M	R
Query Conservation
Alig confidence															.																	.
Template Conservation															.																	.
Template Sequence		K	S	E	F	F	I	P	F	V	V	N	D	L	.	I	R	S	G	R	A	S	V	E	V	L	D	T	T	A	R	.	W	F	G	V	T	Y	S	D	D	R	P	G	V	V	A	K	L	R
Template Known Secondary structure		S													.				T	S									S			.		B			S	S	G	G	G
Template Predicted Secondary structure															.																	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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