Job Description P04951 Confidence 99.92% Date Thu Jan 5 10:58:26 GMT 2012 Rank 44 Aligned Residues 234 % Identity 16% Template c3brkX_ PDB info PDB header:transferase Chain: X: PDB Molecule:glucose-1-phosphate adenylyltransferase; PDBTitle: crystal structure of adp-glucose pyrophosphorylase from2 agrobacterium tumefaciens Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.							.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.									.	.	.
Predicted Secondary structure																			.	.	.	.	.	.											.																								.	.											.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.											.																								.	.											.	.	.	.	.	.	.	.
Query Sequence		S	F	V	V	I	I	P	A	R	Y	A	S	T	R	L	P	G	.	.	.	.	.	.	K	P	L	V	D	I	N	G	K	P	.	M	I	V	H	V	L	E	R	A	R	E	S	G	A	E	R	I	I	V	A	T	D	H	.	.	E	D	V	A	R	A	V	E	A	A	.	.	.	.	.	.	.	.	G	G	E
Query Conservation																			.	.	.	.	.	.											.																								.	.											.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.											.																								.	.											.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	X	A	Y	V	L	A	G	G	R	G	S	R	L	K	E	L	T	D	R	R	A	K	P	A	V	Y	F	G	G	K	A	R	I	I	D	F	A	L	S	N	A	L	N	S	G	I	R	R	I	G	V	A	T	Q	Y	K	A	H	S	L	I	R	H	L	Q	R	G	W	D	F	F	R	P	E	R	N	E	S
Template Known Secondary structure		G												G	G	G	G	G	G	G	S	S	S		G	G	G	S			T	T	T			T											T	T										T	T												S					G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		V	C	M	T	R	A	D	H	Q	S	G	T	E	R	L	A	E	V	.	V	E	K	C	A	F	S	D	D	T	V	I	V	N	V	Q	G	D	E	P	M	I	P	A	T	I	I	R	Q	V	A	D	N	L	A	Q	R	Q	V	G	M	A	T	L	A	V	P	I	H	N	A	E	E	A	F	N	P	N	A	V	K
Query Conservation																				.
Alig confidence																				.																						.	.																																	.	.	.
Template Conservation																																										.	.																																	.	.	.
Template Sequence		F	D	I	L	P	A	S	W	Y	E	G	T	A	D	A	V	Y	Q	N	I	D	I	I	E	P	Y	A	P	E	Y	X	V	I	L	A	G	D	H	I	Y	.	.	K	X	D	Y	E	Y	X	L	Q	Q	H	V	D	S	G	A	D	V	T	I	G	C	L	E	V	P	R	X	E	A	T	G	.	.	.	F	G	V
Template Known Secondary structure																			T	T										S							S	S				.	.		B		T										T	T		S										T	T	G	G	G	G	.	.	.	S
Template Predicted Secondary structure																																										.	.																																	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.				.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																																																					.	.	.
Query SS confidence																																																																					.	.	.
Query Sequence		V	V	L	D	A	E	G	Y	A	L	Y	F	S	R	A	T	I	P	W	D	R	D	R	F	A	E	G	L	E	T	V	G	D	N	F	L	R	H	L	G	I	Y	G	Y	R	A	G	F	I	R	R	Y	V	N	W	Q	P	S	P	L	E	H	I	E	M	L	E	.	.	.	Q	L	R	V	L	W	Y	G	E	K
Query Conservation																																																																					.	.	.
Alig confidence																		.	.	.	.	.	.																																														.	.	.
Template Conservation																		.	.	.	.	.	.
Template Sequence		X	H	V	N	E	K	D	E	I	I	D	F	I	E	K	P	.	.	.	.	.	.	A	D	P	P	G	I	P	G	N	E	G	F	A	L	A	S	X	G	I	Y	V	F	H	T	K	F	L	X	E	A	V	R	R	D	A	A	D	I	I	P	Y	I	V	E	H	G	K	A	V	A	H	R	F	A	D	S	C	V
Template Known Secondary structure						T	T	S	B							S		.	.	.	.	.	.	S	S				B	T	T	B	T	T																					T	S	S					T	T						S											B
Template Predicted Secondary structure																		.	.	.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.							190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	H	V	A	V	A	Q	E	V	P	G	T	G	V	D	T	P	E	D	L	E	R	V	R	A	E	M
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		R	S	D	F	E	H	E	P	Y	.	W	R	D	V	G	T	I	D	A	Y	W	Q	A	N	I	D	L
Template Known Secondary structure				T	T		S	S			.						S											T
Template Predicted Secondary structure											.
Template SS confidence
		258	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions