Job Description P04951 Confidence 94.65% Date Thu Jan 5 10:58:26 GMT 2012 Rank 77 Aligned Residues 187 % Identity 11% Template c3bcvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative glycosyltransferase protein; PDBTitle: crystal structure of a putative glycosyltransferase from bacteroides2 fragilis Resolution 2.35 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.									.	.
Query SS confidence																																												.	.									.	.
Query Sequence		S	F	V	V	I	I	P	A	R	Y	A	S	T	R	L	P	G	K	P	L	V	D	I	N	G	K	P	M	I	V	H	V	L	E	R	A	R	E	S	G	A	E	.	.	R	I	I	V	A	T	D	H	.	.	E	D	V	A	R	A	V	E	A	A	G	G	E	V	C	M	T	R	A	D	H	Q	S	G	T	E
Query Conservation																																												.	.									.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.									.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	S	V	I	V	P	I	Y	N	V	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	D	Q	C	V	Q	A	L	L	A	Q	T	L	S	D	I	E	I	I	L	I	D	D	E	S	P	D	N	C	P	K	I	C	D	D	Y	A	A	Q	Y	P	N	I	K	V	I	H	K	K	N	A	G
Template Known Secondary structure		S								S	S		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T										T		S	S	S	S											S	S	S													S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.															.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	A	E	V	V	E	K	C	A	F	S	D	D	T	V	I	V	N	V	Q	G	D	E	P	M	I	P	A	T	I	I	R	Q	V	A	D	N	L	A	Q	R	Q	V	G	M	A	T	L	A	V	P	I	H	N	A	E	E	A	F	N	P	N	A	V	K	V	V	L	D	A	E	G	Y	A	L	Y	F	S	R
Query Conservation
Alig confidence																									.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	X	A	C	N	S	G	L	D	V	A	T	G	E	Y	V	A	F	C	D	S	D	.	D	Y	V	D	S	D	X	Y	X	T	X	Y	N	V	A	Q	K	Y	T	C	D	A	V	F	T	F	K	L	Y	K	N	K	N	E	I	H	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure															S	S							T	T	.					T	T													T		S										S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		A	T	I	P	W	D	R	D	R	F	A	E	G	L	E	T	V	G	D	N	F	L	R	H	L	G	I	Y	G	Y	R	A	G	F	I	R	R	Y	V	.	.	N	W	Q	P	S	P	L	E	H	I	E	M	L	E	Q	L	R	V	L	W	Y	G	E	K	I	H	V	A	V
Query Conservation																																									.	.
Alig confidence		.	.	.	.																																				.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	L	K	D	L	I	A	S	D	P	Y	A	R	E	E	R	A	I	Q	V	S	A	K	V	V	L	Y	R	R	N	L	I	E	K	K	H	L	R	F	V	S	E	R	I	L	P	S	E	D	L	I	F	N	V	D	V	L	A	N	S	N	I	V	C	V	L	P
Template Known Secondary structure		.	.	.	.		G	G	G	T	S	S													T		S												T	T						T	T	T		T	T											T	T		S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions