Job Description P04951 Confidence 99.97% Date Thu Jan 5 10:58:26 GMT 2012 Rank 22 Aligned Residues 213 % Identity 23% Template c2xwlB_ PDB info PDB header:transferase Chain: B: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase; PDBTitle: crystal structure of ispd from mycobacterium smegmatis in complex2 with ctp and mg Resolution 1.49 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.																								.
Query SS confidence																		.	.	.																								.
Query Sequence		F	V	V	I	I	P	A	R	Y	A	S	T	R	L	P	G	.	.	.	K	P	L	V	D	I	N	G	K	P	M	I	V	H	V	L	E	R	A	R	E	S	G	.	A	E	R	I	I	V	A	T	D	H	E	D	V	A	R	A	V	E	A	A	G	G	E	V	C	M	T	R	A	D	H	Q	S	G	T	E	R
Query Conservation																		.	.	.																								.
Alig confidence																		.	.	.																								.
Template Conservation
Template Sequence		T	V	A	V	V	P	A	A	G	S	G	E	R	L	R	A	G	R	P	K	A	F	V	T	L	G	G	T	P	L	L	E	H	A	L	S	G	L	R	A	S	G	V	I	D	R	I	V	I	A	V	P	P	A	L	T	D	E	S	K	L	V	F	G	G	E	D	S	V	I	V	S	G	G	V	D	R	T	E	S
Template Known Secondary structure													T	T	T	T	S	S	S		G	G	G	S			T	T														T	S											G	G	G										B	T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	E	V	V	E	K	C	A	F	S	D	D	T	V	I	V	N	V	Q	G	D	E	P	M	I	P	A	T	I	I	R	Q	V	A	D	N	L	A	Q	R	Q	V	G	M	A	T	L	A	V	P	I	H	N	A	E	E	A	F	N	P	N	A	V	K	V	V	L	D	A	E	G	Y	A	L	Y	F	S	R	A
Query Conservation
Alig confidence											.	.																																														.	.	.	.	.	.	.	.	.	.												.	.	.
Template Conservation											.	.																																														.	.	.	.	.	.	.	.	.	.												.	.	.
Template Sequence		V	A	L	A	L	E	A	A	G	.	.	D	A	E	F	V	L	V	H	D	A	A	R	A	L	T	P	P	A	L	I	A	R	V	V	A	A	L	K	E	G	H	S	A	V	V	P	G	L	A	P	A	D	T	I	K	.	.	.	.	.	.	.	.	.	.	A	V	D	A	N	G	A	V	L	G	T	.	.	.
Template Known Secondary structure							T	T	S		.	.	S		S							T	T		T	T																T		S									S	S				.	.	.	.	.	.	.	.	.	.				T	T	S						.	.	.
Template Predicted Secondary structure											.	.																																														.	.	.	.	.	.	.	.	.	.												.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.											.	.	.	140	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	P	W	D	R	D	R	F	A	E	G	L	E	T	V	G	D	N	F	L	R	H	L	G	I	Y	G	Y	R	A	G	F	I	R	R	Y	V	N	W	Q	P	S	P	L	E	H	I	E	M	L	E	Q	L	R	V	L	W	Y	G	E	K	I	H	V	A	V	A	Q	E	V	P	G	T	G	V	D	T	P	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.																					.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.																					.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	R	A	G	L	R	A	V	Q	T	P	Q	G	F	H	A	D	V	L	R	R	A	Y	A	R	A	T	A	G	G	V	T	D	.	.	.	D	A	S	L	V	E	Q	L	G	T	P	V	Q	I	V	D	G	D	P	L	.	A	F	K	I	T	T	P	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G						S														T	T			S	S	S				.	.	.							T	T	T										G	G	.	G					S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.																					.
Template SS confidence
																148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	E	R	V	R	A	E	M	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	V	L	A	E	A	V	L	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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