Job Description P04951 Confidence 99.96% Date Thu Jan 5 10:58:26 GMT 2012 Rank 26 Aligned Residues 234 % Identity 14% Template c2ux8G_ PDB info PDB header:transferase Chain: G: PDB Molecule:glucose-1-phosphate uridylyltransferase; PDBTitle: crystal structure of sphingomonas elodea atcc 31461 glucose-2 1-phosphate uridylyltransferase in complex with glucose-3 1-phosphate. Resolution 2.65 Å

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		1	.	.	.			.	.	.	.	.	10	.	.	.	.	.	.	.	.							.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60
Predicted Secondary structure						.	.															.	.	.	.	.	.																																		.	.										.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.															.	.	.	.	.	.																																		.	.										.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	F	V	.	.	V	I	I	P	A	R	Y	A	S	T	R	L	P	G	.	.	.	.	.	.	K	P	L	V	D	I	N	G	K	P	M	I	V	H	V	L	E	R	A	R	E	S	G	A	E	R	I	I	V	A	T	D	H	.	.	E	D	V	A	R	A	V	E	A	.	.	.	.	.	.	.	.	.	.
Query Conservation						.	.															.	.	.	.	.	.																																		.	.										.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.															.	.	.	.	.	.																																		.	.										.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	K	P	L	R	K	A	V	F	P	V	A	G	L	G	T	R	F	L	P	A	T	K	A	M	P	K	E	M	L	P	V	V	D	R	P	L	I	Q	Y	A	V	D	E	A	V	E	A	G	I	E	Q	M	I	F	V	T	G	R	G	K	S	A	L	E	D	H	F	D	I	A	Y	E	L	E	A	T	M	A	A
Template Known Secondary structure																	G	G	G	T	T	T	T	S	S	S		G	G	G				T	T														T	T										T	T								T	S											T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
															61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	G	E	V	C	M	T	R	A	D	H	Q	S	G	T	E	R	L	A	E	V	V	E	K	C	A	F	S	D	D	T	V	I	V	N	V	Q	G	D	E	P	M	I	P	A	T	I	I	R	Q	V	A	D	N	L	A	Q	R	Q	V	G	M	A	T	L	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Template Conservation																																										.
Template Sequence		R	G	K	S	L	D	V	L	D	G	T	R	L	K	P	G	N	I	A	Y	V	R	Q	Q	E	P	M	G	L	G	H	A	V	W	C	A	R	D	I	V	.	G	D	E	P	F	A	V	L	L	P	D	D	F	M	F	G	Q	P	G	C	L	K	Q	M	V	D	A	Y	N	K	V	G	G	N	L	I	C	A	E
Template Known Secondary structure		T	T			G	G	G	G	T	T	S				T	T	S								S										T	T					.		S	S							T	T						S	S															S
Template Predicted Secondary structure																																										.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	I	H	N	A	E	E	A	F	N	P	N	A	V	K	V	V	L	D	A	E	G	Y	A	L	Y	F	S	R	A	T	I	P	W	D	R	D	R	F	A	E	G	L	E	T	V	G	D	N	F	L	R	H	L	G	I	Y	G	Y	R	A	G	F	I	R	R	Y	V	N	W	Q	P	S	P	L	E	H	I	E
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	V	P	D	D	Q	T	H	R	Y	G	I	I	T	P	G	T	Q	D	G	V	L	T	E	V	K	G	L	V	E	K	P	.	.	.	.	.	.	.	.	.	.	.	A	P	G	T	A	P	S	N	L	S	V	I	G	R	Y	I	L	Q	P	E	V	M	R	I	L	E	N	Q	G	K	G	A	G	G	E	I	Q
Template Known Secondary structure					G	G	G	G	G	G	S										T	T									S	S		.	.	.	.	.	.	.	.	.	.	.		T	T			S		S											T									T	T	T	S	S	T	T		S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.												.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	E	Q	L	R	V	L	W	Y	G	E	K	I	H	V	A	V	A	Q	E	V	P	G	T	G	V	D	T	P	E	D	L	E	R	V	R	A	E	M
Query Conservation
Alig confidence																								.
Template Conservation																								.
Template Sequence		L	T	D	A	M	Q	R	M	I	G	D	Q	P	F	H	G	V	T	F	Q	G	T	.	R	Y	D	C	G	D	K	A	G	F	I	Q	A	N	L	A	V
Template Known Secondary structure		S					G	G	G	T	T	T	S								S			.				T	T	S
Template Predicted Secondary structure																								.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions