Job Description P04951 Confidence 99.85% Date Thu Jan 5 10:58:26 GMT 2012 Rank 58 Aligned Residues 219 % Identity 12% Template c2qh5B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:mannose-6-phosphate isomerase; PDBTitle: crystal structure of mannose-6-phosphate isomerase from helicobacter2 pylori Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.			.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																	.	.												.																										.	.											.	.
Query SS confidence																	.	.												.																										.	.											.	.
Query Sequence		M	S	F	V	V	I	I	P	A	R	Y	A	S	T	R	.	.	L	P	G	K	P	L	V	D	I	N	G	.	K	P	M	I	V	H	V	L	E	R	A	R	E	S	G	A	E	R	I	I	V	A	T	D	H	.	.	E	D	V	A	R	A	V	E	A	A	.	.	G	G	E	V	C	M	T	R	A	D	H	Q
Query Conservation																	.	.												.																										.	.											.	.
Alig confidence											.	.	.	.			.	.			.									.																										.	.											.	.
Template Conservation											.	.	.	.							.
Template Sequence		L	K	I	K	N	I	L	L	S	.	.	.	.	S	R	S	L	Y	P	.	K	Q	F	L	K	L	F	D	H	K	S	L	F	E	L	S	F	K	R	N	A	S	L	V	D	E	T	L	I	V	C	N	E	K	H	Y	F	L	A	L	E	E	I	K	N	E	I	K	N	K	S	V	G	F	L	L	E	S	L	S
Template Known Secondary structure											.	.	.	.		T	T	T	S		.	G	G	G				S	S	S													T	T		S								G	G	G								T	T	T	T		S	S									S	S
Template Predicted Secondary structure											.	.	.	.							.
Template SS confidence
		1	.	.	.	.	.	.	.	.					10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																														.	.	.
Query SS confidence																																														.	.	.
Query Sequence		S	G	T	E	R	L	A	E	V	V	E	K	C	A	F	S	D	D	T	V	I	V	N	V	Q	G	D	E	P	M	I	P	A	T	I	I	R	Q	V	A	D	N	L	A	.	.	.	Q	R	Q	V	G	M	A	T	L	A	V	P	I	H	N	A	E	E	A	F	N	P	N	A	V	K	V	V	L	D	A	E	G
Query Conservation																																														.	.	.
Alig confidence																	.																													.	.	.																					.	.	.	.	.
Template Conservation																	.																																																				.	.	.	.	.
Template Sequence		K	N	T	A	N	A	I	A	L	S	A	L	M	S	D	.	K	E	D	L	L	I	V	T	P	S	D	H	L	I	K	D	L	Q	A	Y	E	N	A	I	K	K	A	I	D	L	A	Q	K	G	F	L	V	T	F	G	V	S	I	D	K	P	N	T	E	F	G	.	.	.	.	.	Y	I	E	S	P	N	G	L
Template Known Secondary structure														T	S		.	T	T	S							S	S		B																			T	T	T										S	S			T	T	S		.	.	.	.	.					S	S	S	S
Template Predicted Secondary structure																	.																																																				.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.						.	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	L	Y	F	S	R	A	T	I	P	W	D	R	D	R	F	A	E	G	L	E	T	V	G	D	N	F	L	R	H	L	G	I	Y	G	Y	R	A	G	F	I	R	R	Y	V	N	W	Q	P	S	P	L	E	H	I	E	M	L	E	Q	L	R	V	L	W	Y	G	E	K	I	H	V	A	V	A	Q	E	V	P
Query Conservation
Alig confidence											.	.	.	.	.																																										.	.	.	.																					.
Template Conservation											.	.	.	.	.																																										.	.	.	.																					.
Template Sequence		D	V	K	R	F	I	E	K	P	.	.	.	.	.	S	L	D	K	A	I	E	F	Q	K	S	G	G	F	Y	F	N	S	G	M	F	V	F	Q	A	G	V	F	L	D	E	L	K	K	H	A	P	T	I	L	K	.	.	.	.	G	C	E	R	A	F	E	S	L	E	N	A	Y	F	F	E	K	K	I	A	.
Template Known Secondary structure		B		S				S	S		.	.	.	.	.																																										.	.	.	.								T							S	S					.
Template Predicted Secondary structure											.	.	.	.	.																																										.	.	.	.																					.
Template SS confidence
		160	.	.	.	.	.	.	.	.						.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.					210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	G	V	D	T	P	E	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	S	E	K	S	M	Q	D	L
Template Known Secondary structure									T	T	S
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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