Job Description P04951 Confidence 93.03% Date Thu Jan 5 10:58:26 GMT 2012 Rank 79 Aligned Residues 190 % Identity 8% Template c2qgiA_ PDB info PDB header:transferase Chain: A: PDB Molecule:atp synthase subunits region orf 6; PDBTitle: the udp complex structure of the sixth gene product of the f1-atpase2 operon of rhodobacter blasticus Resolution 1.65 Å

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		45	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.						.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure									.	.	.												.	.	.	.	.
Query SS confidence									.	.	.												.	.	.	.	.
Query Sequence		I	I	V	A	T	D	H	.	.	.	E	D	V	A	R	A	V	E	A	A	G	.	.	.	.	.	G	E	V	C	M	T	R	A	D	H	Q	S	G	T	E	R	L	A	E	V	V	E	K	C	A	F	S	D	D	T	V	I	V	N	V	Q	G	D	E	P	M	I	P	A	T	I	I	R	Q	V	A	D	N	L
Query Conservation									.	.	.												.	.	.	.	.
Alig confidence									.	.	.												.	.	.	.	.																																										.
Template Conservation																																																																					.
Template Sequence		C	S	L	V	R	D	Q	A	K	Y	D	R	L	L	E	S	F	E	R	F	G	F	T	P	D	K	A	E	F	L	A	A	D	N	R	E	G	N	Q	F	H	G	F	S	W	H	K	Q	M	L	P	R	C	K	G	R	Y	V	I	F	C	H	E	D	V	E	L	.	V	D	R	G	Y	D	D	L	V	A	A	I
Template Known Secondary structure						S															T	T			T	T	T									S	S	S		S	S		T	T	T						G	G	G			S	S							T	T				.	S	S
Template Predicted Secondary structure																																																																					.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.
		117	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		A	Q	R	.	Q	V	G	M	A	T	L	A	V	P	I	H	N	A	E	E	A	F	N	P	N	A	V	K	V	V	L	D	A	E	G	Y	A	L	Y	F	S	R	A	T	I	P	W	D	R	D	R	F	A	E	G	L	E	T	V	G	D	N	F	L	R	H	L	G	I	Y	G	Y	R	A	G	F	I	R	R	Y
Query Conservation					.
Alig confidence					.																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	L	E	E	A	D	P	K	W	L	V	A	G	V	A	G	S	P	W	R	P	L	N	H	S	.	.	.	.	.	.	.	.	.	.	.	.	V	T	A	Q	A	L	H	I	S	D	V	F	G	N	D	R	R	R	G	N	V	P	C	R	V	E	S	L	D	E	C	F	L	L	M	R	R	L	K	P	V	L
Template Known Secondary structure									T	T						S					S	S		S		T	T	.	.	.	.	.	.	.	.	.	.	.	.	S										T	T							S		S	S								T	T						T	T	B
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.													.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	W	Q	P	S	P	L	E	H	I	E	M	L	E	Q	L	R	V	L	W	Y	G	E	K	I	H	V	A	V	A	Q	E	V	P	G	T	G	V	D	T	P	E	D	L	E	R	V	R	A	E	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	S	Y	D	M	Q	G	F	H	Y	Y	G	A	D	L	C	L	Q	A	E	F	L	G	G	R	A	Y	A	I	D	F	H	L	H	H	Y	G	R	A	I	A	D	E	N	F	H	R	L	R	Q	E	M
Template Known Secondary structure				S	S			S	S	S	S												T	T																			S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions