Return to main results Retrieve Phyre Job Id

Job DescriptionP04951
Confidence99.91%DateThu Jan 5 10:58:26 GMT 2012
Rank48Aligned Residues227
% Identity19%Templatec2oi6A_
PDB info PDB header:transferaseChain: A: PDB Molecule:bifunctional protein glmu; PDBTitle: e. coli glmu- complex with udp-glcnac, coa and glcn-1-po4
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10........ .20.........30.........40.........50.........60.........70........
Predicted Secondary structure 









...



















Query SS confidence 
















. . .



























































Query Sequence  SFVVIIPARYASTRLPG. . . KPLVDINGKPMIVHVLERARESGAERIIVATDHEDVARAVEAAGGEVCMTRADHQSGTER
Query Conservation      

 
 
 


   ...
 
  
 




   
  
   

  



     
                        
Alig confidence 
















...



























































Template Conservation 
 





 
 
 

 
  

 



 
 


 
 
  
   
   
 

       
        
  
      

  
Template Sequence  AMSVVILAAGKGTRMYSDLPKVLHTLAGKAMVQHVIDAANELGAAHVHLVYGHGGDLLKQALKDDNLNWVLQAEQLGTGH
Template Known Secondary structure 


S

GGG

SS
GGGSTTT
S
SS



TT
SS


Template Predicted Secondary structure 


































Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   7980.........90.........100.........110.........120.........130.........140.........150........
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  LAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRA
Query Conservation                                
   
                                    
        
Alig confidence 








.



























..


















......














Template Conservation 

       .      

  

                ..                   ......        
    
 
Template Sequence  AMQQAAPFF. ADDEDILMLYGDVPLISVETLQRLRDAK. . PQGGIGLLTVKLDDPTGYG. . . . . . RITRENGKVTGIVEH
Template Known Secondary structure  GGGS.
TTSTT
TT


..
TTS
S

TTS
......TT
G
Template Predicted Secondary structure 
.






..






......




Template SS confidence 















































































   85....90... ......100.........110.........120. ........130.........140 .........150.....
 
   159160.........170.........180.........190.........200........ .210.........220.........230.....
Predicted Secondary structure 






















...













Query SS confidence 

















































. . .


























Query Sequence  TIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEM. . . LEQLRVLWYGEKIHVAVAQEVPGTGVD
Query Conservation                          


      
                ...   
  
  
  
            

Alig confidence 



.........




































...




















.




Template Conservation      .........           

 
                    
    
           
        .     
Template Sequence  KDAT. . . . . . . . . DEQRQIQEINTGILIANGADMKRWLAKLTNNNAQGEYYITDIIALAYQEGREIVAVHPQRL. SEVEG
Template Known Secondary structure  GG

.........TTGGG

TT



STT
S

TTTT



SSG.GGG

Template Predicted Secondary structure 



.........























.
Template SS confidence 















































































   156... 160.........170.........180.........190.........200.........210.........220 .....
 
   236...240.......
Predicted Secondary structure 
Query SS confidence 











Query Sequence  TPEDLERVRAEM
Query Conservation 




  

  
Alig confidence 











Template Conservation              
Template Sequence  VNNRLQLSRLER
Template Known Secondary structure 
SS
Template Predicted Secondary structure 





Template SS confidence 











   226...230.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions