Job Description P04951 Confidence 96.48% Date Thu Jan 5 10:58:26 GMT 2012 Rank 75 Aligned Residues 198 % Identity 10% Template c2oefA_ PDB info PDB header:transferase Chain: A: PDB Molecule:utp-glucose-1-phosphate uridylyltransferase 2, PDBTitle: open and closed structures of the udp-glucose2 pyrophosphorylase from leishmania major Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.				.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.		.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure																		.	.	.									.															.	.	.	.					.									.	.	.													.	.	.	.	.	.
Query SS confidence																		.	.	.									.															.	.	.	.					.									.	.	.													.	.	.	.	.	.
Query Sequence		S	F	V	V	I	I	P	A	R	Y	A	S	T	R	L	P	.	.	.	G	K	P	L	V	D	I	N	.	G	K	P	M	I	V	H	V	L	E	R	A	R	E	.	.	.	.	S	G	A	E	.	R	I	I	V	A	T	D	H	.	.	.	E	D	V	A	R	A	V	E	A	A	G	G	.	.	.	.	.	.
Query Conservation																		.	.	.									.															.	.	.	.					.									.	.	.													.	.	.	.	.	.
Alig confidence																		.	.	.									.															.	.	.	.					.									.	.	.													.	.	.	.	.	.
Template Conservation
Template Sequence		S	T	V	V	L	K	L	N	G	G	L	G	T	G	X	G	L	C	D	A	K	T	L	L	E	V	K	D	G	K	T	F	L	D	F	T	A	L	Q	V	Q	Y	L	R	Q	H	C	S	E	H	L	R	F	X	L	X	D	S	F	N	T	S	A	S	T	K	S	F	L	K	A	R	Y	P	W	L	Y	Q	V	F
Template Known Secondary structure		T										B	S	G	G	G	T			S	B	G	G	G	S				T	T																		T		T	T									T	T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
				64	.	.	.	.	.	70	.	.																							.	.	.	.	.	.	.	80	.	.							.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure		.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.
Query SS confidence		.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.
Query Sequence		.	.	E	V	C	M	T	R	A	D	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	S	G	T	E	R	L	A	E	V	.	.	.	.	.	.	V	E	K	C	A	F	S	D	D	T	V	I	V	N	V	Q	G	D	E	P	M	I	P	A	T	I	I	R	Q	V	A
Query Conservation		.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.
Alig confidence		.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.																											.	.
Template Conservation																																																																													.	.
Template Sequence		D	S	E	V	E	L	X	Q	N	Q	V	P	K	I	L	Q	D	T	L	E	P	A	A	W	A	E	N	P	A	Y	E	W	A	P	P	G	H	G	D	I	Y	T	A	L	Y	G	S	G	K	L	Q	E	L	V	E	Q	G	Y	R	Y	X	F	V	S	N	G	D	N	L	G	A	T	I	D	K	.	.	R	V	L
Template Known Secondary structure					T												T	T	T		S	B				T	T		G	G	G	G						T	T									T	S								T	T									T	T	B	T	T						.	.
Template Predicted Secondary structure																																																																													.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.			230	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.							.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.
Query Sequence		D	N	L	A	Q	R	Q	V	G	M	A	T	L	A	V	P	I	H	N	A	E	E	A	F	N	P	N	A	V	K	V	V	L	D	A	E	G	Y	.	.	.	.	.	.	A	L	Y	F	S	R	A	T	I	P	W	D	R	D	R	F	A	E	G	L	E	T	V	G	D	N	F	L	R	H	L	G	I	Y	G	Y
Query Conservation																																								.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.
Template Conservation
Template Sequence		A	Y	X	E	K	E	K	I	D	F	L	X	E	V	C	R	R	T	E	S	D	K	K	G	G	H	L	A	R	Q	T	V	Y	V	K	G	K	D	G	Q	P	D	A	E	K	R	V	L	L	L	R	E	S	A	Q	C	P	K	A	D	X	E	S	F	Q	D	I	N	K	Y	S	F	F	N	T	N	N	L	W	I
Template Known Secondary structure								T		S										G	G	G	T	T	S														S	S	S													S	T	T	S		T	T	T							T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	G	F	I	R	R	Y	V	N	W	Q	P	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	P	V	L	L	E	T	X	Q	E	H	G	G
Template Known Secondary structure													T	T	S
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions