Job Description P04951 Confidence 99.95% Date Thu Jan 5 10:58:26 GMT 2012 Rank 33 Aligned Residues 240 % Identity 15% Template c1yp3C_ PDB info PDB header:transferase Chain: C: PDB Molecule:glucose-1-phosphate adenylyltransferase small PDBTitle: crystal structure of potato tuber adp-glucose2 pyrophosphorylase in complex with atp Resolution 2.60 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.							.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60				.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.									.																										.	.										.	.	.
Query SS confidence																			.	.	.	.	.	.									.																										.	.										.	.	.
Query Sequence		S	F	V	V	I	I	P	A	R	Y	A	S	T	R	L	P	G	.	.	.	.	.	.	K	P	L	V	D	I	N	G	.	K	P	M	I	V	H	V	L	E	R	A	R	E	S	G	A	E	R	I	I	V	A	T	D	H	.	.	E	D	V	A	R	A	V	E	A	.	.	.	A	G	G	E	V	C	M	T	R
Query Conservation																			.	.	.	.	.	.									.																										.	.										.	.	.
Alig confidence																			.	.	.	.	.	.									.																										.	.										.	.	.
Template Conservation
Template Sequence		S	V	L	G	I	I	L	G	G	G	A	G	T	R	L	Y	P	L	T	K	K	R	A	K	P	A	V	P	L	G	A	N	Y	R	L	I	D	I	P	V	S	N	C	L	N	S	N	I	S	K	I	Y	V	L	T	Q	F	N	S	A	S	L	N	R	H	L	S	R	A	Y	A	S	E	G	F	V	E	V	L	A
Template Known Secondary structure											S	S		T	T	S	T	T	T	T	T	T	S		G	G	G	S			T	T	T			T	T										T	T									S	S
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		70	.	.	.									.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure						.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.
Query Sequence		A	D	H	Q	.	.	.	.	.	.	.	.	S	G	T	E	R	L	A	E	V	V	E	K	C	A	F	S	D	D	T	V	I	V	N	V	Q	G	D	E	P	M	I	P	A	T	I	I	R	Q	V	A	D	N	L	A	Q	R	Q	V	G	M	A	T	L	A	V	P	I	H	N	A	E	E	A	F	N	P	N	A
Query Conservation						.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.																																		.	.																														.	.	.
Template Conservation																																															.	.																														.	.	.
Template Sequence		A	Q	Q	S	P	E	N	P	D	W	F	Q	G	T	A	D	A	V	R	Q	Y	L	W	L	F	E	E	H	T	V	L	E	Y	L	I	L	A	G	D	H	L	Y	R	M	D	.	.	Y	E	K	F	I	Q	A	H	R	E	T	D	A	D	I	T	V	A	A	L	P	M	D	E	K	R	A	T	A	.	.	.	F
Template Known Secondary structure		S	S		S	S	S			S	S																T	T	S			S							S	S							.	.											T	T		S														T	T	.	.	.	S
Template Predicted Secondary structure																																															.	.																														.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160									.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.
Query Sequence		V	K	V	V	L	D	A	E	G	Y	A	L	Y	F	S	R	A	T	I	.	.	.	.	.	.	.	.	P	W	D	R	D	R	F	A	E	G	L	E	T	V	G	D	N	F	L	R	H	L	G	I	Y	G	Y	R	A	G	F	I	R	R	Y	V	N	W	Q	P	S	P	L	E	H	I	E	M	L	E	Q	L	R
Query Conservation																					.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	M	K	I	D	E	E	G	R	I	I	E	F	A	E	K	P	Q	G	E	Q	L	Q	A	M	K	V	D	T	T	I	L	G	L	D	D	K	R	A	K	E	M	P	F	I	A	S	M	G	I	Y	V	I	S	K	D	V	M	L	N	L	L	R	D	K	F	P	G	A	N	D	F	G	S	E	V	I	P	G
Template Known Secondary structure								T	T		B							S								T	T				G	G	G	G	T																															T	T		T	T				T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	W	Y	G	E	K	I	H	V	A	V	A	Q	E	V	P	G	T	G	V	D	T	P	E	D	L	E	R	V	R	A	E	M
Query Conservation
Alig confidence																		.
Template Conservation																		.
Template Sequence		A	T	S	L	G	M	R	V	Q	A	Y	L	Y	D	G	Y	.	W	E	D	I	G	T	I	E	A	F	Y	N	A	N	L	G	I
Template Known Secondary structure				T	T	T										S		.					S	S										G	G
Template Predicted Secondary structure																		.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions