Job Description P04951 Confidence 99.95% Date Thu Jan 5 10:58:26 GMT 2012 Rank 30 Aligned Residues 215 % Identity 17% Template c1jylC_ PDB info PDB header:transferase Chain: C: PDB Molecule:ctp:phosphocholine cytidylytransferase; PDBTitle: catalytic mechanism of ctp:phosphocholine2 cytidylytransferase from streptococcus pneumoniae (licc) Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.							.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																				.	.	.	.	.	.																																		.	.
Query SS confidence																				.	.	.	.	.	.																																		.	.
Query Sequence		M	S	F	V	V	I	I	P	A	R	Y	A	S	T	R	L	P	G	.	.	.	.	.	.	K	P	L	V	D	I	N	G	K	P	M	I	V	H	V	L	E	R	A	R	E	S	G	A	E	R	I	I	V	A	T	D	H	.	.	E	D	V	A	R	A	V	E	A	A	G	G	E	V	C	M	T	R	A	D	H
Query Conservation																				.	.	.	.	.	.																																		.	.
Alig confidence																				.	.	.	.	.	.																																		.	.
Template Conservation
Template Sequence		I	R	V	K	A	I	I	L	A	A	G	L	G	T	R	L	R	P	L	T	E	N	T	P	K	A	L	V	Q	V	N	Q	K	P	L	I	E	Y	Q	I	E	F	L	K	E	K	G	I	N	D	I	I	I	I	V	G	Y	L	K	E	Q	F	D	Y	L	K	E	K	Y	G	V	R	L	V	F	N	D	K	Y	A
Template Known Secondary structure												S			G	G	G	T	T	T	T	S	S	S		G	G	G		B	S	S	S	S	B												T	T										T	T	G	G	G	G															T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	G	T	E	R	L	A	E	V	V	E	K	C	A	F	S	D	D	T	V	I	V	N	V	Q	G	D	E	P	M	I	P	A	T	I	I	R	Q	V	A	D	N	L	A	Q	R	Q	V	G	M	A	T	L	A	V	P	I	H	N	A	E	E	A	F	N	P	N	A	V	K	V	V	L	D	A	E	G	Y	A
Query Conservation
Alig confidence																	.	.	.	.																	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.																	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template Sequence		D	Y	N	N	F	Y	S	L	Y	L	V	K	E	E	L	.	.	.	.	A	N	S	Y	V	I	D	A	D	N	Y	L	F	K	N	M	.	.	.	.	.	F	R	N	D	L	T	R	S	T	Y	F	S	V	Y	R	E	D	C	T	N	E	W	F	.	.	.	.	.	.	.	.	L	V	Y	G	D	D	Y	K	V
Template Known Secondary structure		T	S		T							T	G	G	G		.	.	.	.	T	T						S	S				S	S			.	.	.	.	.			S				S																	.	.	.	.	.	.	.	.					T	T		B
Template Predicted Secondary structure																	.	.	.	.																	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.						.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.									.	.	140	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.						200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.
Query Sequence		L	Y	F	S	R	A	T	I	P	W	D	R	D	R	F	A	E	G	L	E	T	V	G	D	N	F	L	R	H	L	G	I	Y	G	Y	R	A	G	F	I	R	R	Y	V	N	W	Q	.	.	.	.	.	P	S	P	L	E	H	I	E	M	L	E	Q	L	R	V	L	W	Y	G	E	K	I	H	V	A	V	A	Q
Query Conservation																																																	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	D	I	I	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	A	G	R	I	L	S	G	V	S	F	W	D	A	P	T	A	E	K	I	V	S	F	I	D	K	A	Y	V	S	G	E	F	V	D	L	Y	W	D	N	M	V	K	D	N	I	K	E	L	D	V	Y	V	E	E	L	E
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S																							S			S	S			T	T					T	S	G	G	G
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.																	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	P	G	T	G	V	D	T	P	E	D	L	E	R	V	R	A	E	M	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	N	S	I	Y	E	I	D	S	V	Q	D	Y	R	K	L	E	E	I	L	K
Template Known Secondary structure		S	S						S	S											T
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions