Job Description P33596 Confidence 54.63% Date Thu Jan 5 11:52:21 GMT 2012 Rank 18 Aligned Residues 51 % Identity 18% Template d1yg2a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain PadR-like Resolution 2.20

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	D	R	A	V	R	I	L	A	V	R	D	H	S	E	Q	E	L	R	R	K	L	A	A	P	I	M	G	K	N	G	P	E	E	I	D	A	T	A	E	D	Y	E	R	V	I	A	W	C	H	E	H	G	Y	L
Query Conservation
Alig confidence																												.	.	.	.	.
Template Conservation																												.	.	.	.	.
Template Sequence		L	P	H	V	I	L	T	V	L	S	T	R	D	A	T	G	Y	D	I	T	K	E	F	S	A	S	.	.	.	.	.	I	G	Y	F	W	K	A	S	H	Q	Q	V	Y	R	E	L	N	K	M	G	E	Q	G	L	V
Template Known Secondary structure															B										T	T	G	.	.	.	.	.	G	G	G	T																		T	T	S
Template Predicted Secondary structure																												.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.						.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions