Job Description P33596 Confidence 23.23% Date Thu Jan 5 11:52:21 GMT 2012 Rank 128 Aligned Residues 89 % Identity 19% Template d1pdnc_ SCOP info DNA/RNA-binding 3-helical bundle Homeodomain-like Paired domain Resolution 2.50

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.												.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	P	A	Y	A	R	L	L	D	R	A	V	R	I	L	A	V	R	D	H	S	E	Q	E	L	R	R	K	L	A	A	P	I	M	G	K	N	G	P	E	E	I	D	A	T	A	E	D	Y	E	R	V	I	A	W	C	H	E	H	G	Y	L	D	D	S	R	F	.	.	.	.	.	.	.	.	.	.	.	V	A
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.													.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	P	L	P	N	N	I	R	L	K	I	V	E	M	A	A	.	D	G	I	R	P	C	V	I	S	R	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	S	H	G	C	V	S	K	I	L	N	R	Y	Q	E	T	G	S	I	R	P	G	V	I	G	G	S	K	P	R	I	A	T	P	E	I	E
Template Known Secondary structure		S																.	T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	T																			S	S					S						S	S		S	T
Template Predicted Secondary structure																		.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.														.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		77	.	.	80	.	.	.	.		.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.								.	.	.	.	.	.	.	.	110
Predicted Secondary structure										.			.																.	.	.	.	.	.	.
Query SS confidence										.			.																.	.	.	.	.	.	.
Query Sequence		R	F	I	A	S	R	S	R	.	K	G	.	Y	G	P	A	R	I	R	Q	E	L	N	Q	K	G	I	.	.	.	.	.	.	.	S	R	E	A	T	E	K	A	M
Query Conservation										.			.																.	.	.	.	.	.	.
Alig confidence										.			.																.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	R	I	E	E	Y	K	R	S	S	P	G	M	F	S	W	E	I	R	E	K	L	I	R	E	G	V	C	D	R	S	T	A	P	S	V	S	A	I	S	R	L	V
Template Known Secondary structure							T	T	T	T		T	T													T	S	S	S		S	T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions