Return to main results Retrieve Phyre Job Id

Job DescriptionP33596
Confidence23.98%DateThu Jan 5 11:52:21 GMT 2012
Rank126Aligned Residues40
% Identity15%Templated1mkma1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Transcriptional regulator IclR, N-terminal domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.. .......30.........40.........50.........60.........
Predicted Secondary structure  ..
















Query SS confidence 





. .














































Query Sequence  RAVRIL. . AVRDHSEQELRRKLAAPIMGKNGPEEIDATAEDYERVIAWCHEHGYL
Query Conservation   

  
..  
  
  

  

  
                
  

  
 
 


Alig confidence 





..













.............



















Template Conservation   

  
       
  


  
.............
   

  
 
 

   
 
Template Sequence  EILDFIVKNPGDVSVSEIAEKF. . . . . . . . . . . . . NMSVSNAYKYMVVLEEKGFV
Template Known Secondary structure 
SS
B
T.............T

TTS
Template Predicted Secondary structure 





.............





Template SS confidence 






















































   910.........20.........30 .........40.........50
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions