Job Description P33596 Confidence 47.18% Date Thu Jan 5 11:52:21 GMT 2012 Rank 32 Aligned Residues 89 % Identity 9% Template c3ecoB_ PDB info PDB header:transcription Chain: B: PDB Molecule:mepr; PDBTitle: crystal structure of mepr, a transcription regulator of the2 staphylococcus aureus multidrug efflux pump mepa Resolution 2.40 Å

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		17	.	.	20	.	.	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		R	A	V	R	I	L	A	V	R	D	H	.	.	.	S	E	Q	E	L	R	R	K	L	A	A	P	I	M	G	K	N	G	P	E	E	I	D	A	T	A	E	D	Y	E	R	V	I	A	W	C	H	E	H	G	Y	L	D	D	S	R	F	V	A	R	F	I	A	S	R	S	R	K	G	Y	G	P	A	R	I	R
Query Conservation													.	.	.
Alig confidence													.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Template Sequence		H	T	L	G	Y	L	Y	A	H	Q	Q	D	G	L	T	Q	N	D	I	A	K	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	T	G	P	T	V	S	N	L	L	R	N	L	E	R	K	K	L	I	Y	.	.	.	.	.	.	.	.	.	R	Y	V	K	N	I	G	L	T	T	S	G	I	K
Template Known Secondary structure										S		T	T		B										.	.	.	.	.	.	.	.	.	.	.	.	.	T															T	T	T	S			.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.														.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.										.	80	.	.	.	.	.	.	.	.	.	90	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	L	N	Q	K	G	I	S	R	E	A	T	E	K	A	M	R	E	C	D	I	D	W	C	A	L	A	R	D	Q	A	T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	E	A	F	T	S	I	F	D	E	M	E	Q	T	L	V	S	Q	L	S	E	E	E	N	E	Q	M	K	A	N	L	T	K
Template Known Secondary structure						T													T	T	S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions