Return to main results Retrieve Phyre Job Id

Job DescriptionP33596
Confidence100.00%DateThu Jan 5 11:52:21 GMT 2012
Rank1Aligned Residues142
% Identity97%Templatec3c1dA_
PDB info PDB header:recombination, dna binding proteinChain: A: PDB Molecule:regulatory protein recx; PDBTitle: x-ray crystal structure of recx
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80........
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  PAYARLLDRAVRILAVRDHSEQELRRKLAAPIMGKNGPEEIDATAEDYERVIAWCHEHGYLDDSRFVARFIASRSRKGYG
Query Conservation       
   

  
  
  
  

  

  
                
  

  
 
 




  

   
      
 
Alig confidence 






























..........


.


































Template Conservation 
    
   

  
  
  
  

  

  
..........   .
 

 

  
 
 
 


  

            
Template Sequence  PAYARLLDRAVRILAVRDHSEQELRRKLAAP. . . . . . . . . . ATA. EDYERVIAWCHEHGYLDDSRFVARFIASRSRKGYG
Template Known Secondary structure  TTS




..........

.TTS

TT

Template Predicted Secondary structure 



..........

.








Template SS confidence 















































































   910.........20.........30......... 40.. .......50.........60.........70.......
 
   8990.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 

















Query SS confidence 








































































Query Sequence  PARIRQELNQKGISREATEKAMRECDIDWCALARDQATRKYGEPLPTVFSEKVKIQRFLLYRGYLMEDIQEIW
Query Conservation     
   
  


    
   
 
   

   
     

           
 
    
 




   
  
 
Alig confidence 








































































Template Conservation     
   
  


    
  

     
    
     

           
 
    
 




   
  
 
Template Sequence  PARIRQELNQKGISREATEKAMREADIDWAALARDQATRKYGEPLPTVFSEKVKIQRFLLYRGYLMEDIQDIW
Template Known Secondary structure  TT





SS


STT

TT

Template Predicted Secondary structure 

















Template SS confidence 








































































   8990.........100.........110.........120.........130.........140.........150.........160.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions