Job Description P33596 Confidence 37.13% Date Thu Jan 5 11:52:21 GMT 2012 Rank 69 Aligned Residues 97 % Identity 21% Template c3by6C_ PDB info PDB header:transcription regulator Chain: C: PDB Molecule:predicted transcriptional regulator; PDBTitle: crystal structure of a transcriptional regulator from oenococcus oeni Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.								.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.																																														.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.																																														.	.	.	.	.
Query Sequence		T	E	S	T	S	R	R	P	A	Y	A	R	L	L	D	R	A	V	R	I	L	A	V	.	.	.	.	.	.	.	R	D	H	S	E	Q	E	L	R	R	K	L	A	A	P	I	M	G	K	N	G	P	E	E	I	D	A	T	A	E	D	Y	E	R	V	I	A	W	C	H	E	H	G	Y	L	.	.	.	.	.
Query Conservation																									.	.	.	.	.	.	.																																														.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	A	I	T	Q	K	R	P	V	Y	L	Q	L	V	D	R	I	K	N	E	V	A	T	D	V	L	S	A	N	D	Q	L	P	S	V	R	E	T	A	L	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	N	P	N	T	V	A	K	A	Y	K	E	L	E	A	Q	K	V	I	R	T	I	P	G
Template Known Secondary structure																								T	T	S	S		T	T		B												.	.	.	.	.	.	.	.	.	.	.	.	.	T																T	T	S					T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.														.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
								70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	D	D	S	R	F	V	A	R	F	I	A	S	R	S	R	K	G	Y	G	P	A	R	I	R	Q	E	L	N	Q	K	G	I	S	R	E	A	T	E	K	A	M	R	E	C
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																	.	.
Template Conservation																								.	.
Template Sequence		K	G	T	F	I	T	G	N	T	A	S	V	K	N	S	N	Q	N	R	L	L	A	.	.	D	L	S	Q	V	I	A	E	L	I	K	S	G	V	K	G	E	R	I	K	K	I	V	N	D	I
Template Known Secondary structure		T						S																.	.												T	T
Template Predicted Secondary structure																								.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions