Job Description P33596 Confidence 32.70% Date Thu Jan 5 11:52:21 GMT 2012 Rank 88 Aligned Residues 91 % Identity 14% Template c2du9A_ PDB info PDB header:transcription Chain: A: PDB Molecule:predicted transcriptional regulators; PDBTitle: crystal structure of the transcriptional factor from c.glutamicum Resolution 2.28 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.								.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	A	Y	A	R	L	L	D	R	A	V	R	I	L	A	.	.	.	.	.	.	.	V	R	D	H	S	E	Q	E	L	R	R	K	L	A	A	P	I	M	G	K	N	G	P	E	E	I	D	A	T	A	E	D	Y	E	R	V	I	A	W	C	H	E	H	G	Y	L	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	L	Y	K	Q	I	A	S	L	I	E	D	S	I	V	D	G	T	L	S	I	D	Q	R	V	P	S	T	N	E	L	A	A	F	H	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	N	P	A	T	A	R	N	G	L	T	L	L	V	E	A	G	I	L	Y	K	K	R	G	I	G	X	F	V	S	A
Template Known Secondary structure																	S	S	S	S		T	T													S	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T	S					T	T	T						T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.														.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	S	R	F	V	A	R	F	I	A	S	R	S	R	K	G	Y	G	P	A	R	I	R	Q	E	L	N	Q	K	G	I	S	R	E	A	T	E	K	A	M	R	E	C
Query Conservation
Alig confidence																		.
Template Conservation																		.
Template Sequence		Q	A	P	A	L	I	R	E	R	R	D	A	A	F	A	A	.	T	Y	V	A	P	L	I	D	E	S	I	H	L	G	F	T	R	A	R	I	H	A	L	L	D	Q	V
Template Known Secondary structure		T																.			T										T	T
Template Predicted Secondary structure																		.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions