Job Description P33596 Confidence 34.21% Date Thu Jan 5 11:52:21 GMT 2012 Rank 83 Aligned Residues 78 % Identity 6% Template c1u78A_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:transposable element tc3 transposase; PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna Resolution 2.69 Å

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	A	R	F	I	A	S	R	S	R	K	G	Y	G	P	A	R	I	R	Q	E	L	N	Q	K	G	I	S	R	E	A	T	E	K	A	M	R	E	C	D	I	D	W	C	A	L	A	R	D	Q	A	T	R	K	Y	G	E	P	L	P	T	V	F	S	E	K	V	K	I	Q	R	F	L	L	Y	R	G	Y	L
Query Conservation
Alig confidence																									.	.	.																			.	.	.	.	.	.	.
Template Conservation																									.	.	.																			.	.	.	.	.	.	.
Template Sequence		T	E	R	A	Q	L	D	V	M	K	L	L	N	V	S	L	H	E	M	S	R	K	I	.	.	.	S	R	S	R	H	C	I	R	V	Y	L	K	D	P	V	S	Y	G	.	.	.	.	.	.	.	T	S	K	R	A	P	R	R	K	A	L	S	V	R	D	E	R	N	V	I	R	A	A	S	N	S	C	K	T
Template Known Secondary structure													T	T											.	.	.	T												S	G	G	G	T	T	.	.	.	.	.	.	.										S	S
Template Predicted Secondary structure																									.	.	.																			.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50								.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	D	I	Q	E	I	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	D	I	R	N	E	L
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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