Return to main results Retrieve Phyre Job Id

Job DescriptionP46068
Confidence99.47%DateThu Jan 5 12:03:56 GMT 2012
Rank26Aligned Residues204
% Identity14%Templated2fyia1
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   98.100.........110.........120.........130.........140. ........150.........160 .........170...
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Query Sequence  NQELSGTLTLYSRPSIAQCWLVPALGDFTRRYPSISLTVLTGND. . . NVNLQRAGIDLAIYFDDAP. SAQLTHHFLMDEE
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Template Sequence  TNDTSGVLTIATTHTQARYSLPEVIKAFRELFPEVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWH
Template Known Secondary structure 
TT


T
TT

TS
SSSSSTT
TT
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   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
   174.....180.........190.........200.........210.........220.........230.........240.........250...
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Query Sequence  ILPVCSPEYAQRHALTNTVINLCHCTLLHDRQAWSNDSGTDEWHSWAQHYAVNLPTSSGIGFDRSDLAVIAAMNHIGVAM
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Template Sequence  HSLLVPHDHPLTQISPLTLESIAKWPLITYRQGITG. . . . . RSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGIGL
Template Known Secondary structure  TT
GGGTSSS

TTS

TTSTT.....TT



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   168.170.........180.........190.........200... ......210.........220.........230.........240..
 
   254.....260.........270.........280.........290.........300.......
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Query Sequence  GRKRLVQKRLASGELVAPFGDMTVKCHQHYYITTLPGRQWPKIEAFIIWLREQV
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Template Sequence  VAEQSSG. EQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGL
Template Known Secondary structure  GGGGS.TT

TT

TTTS

TT




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Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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