 |
Job Description | P46068 | Confidence | 36.26% | Date | Thu Jan 5 12:03:56 GMT 2012 |
Rank | 340 | Aligned Residues | 75 |
% Identity | 8% | Template | d1atga_ |
SCOP info | Periplasmic binding protein-like II
| Periplasmic binding protein-like II
| Phosphate binding protein-like
|
Resolution | 1.20 |
|
 |
  |   |
229 | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | |
. | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | |
. | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | S | S | G | I | G | F | D | R | S | D | L | A | V | I | A | A | M | N | H | . |
I | G | V | A | M | G | R | K | R | L | V | Q | K | R | L | A | S | G | . |
E | L | V | A | P | F | G | D | M | T | V | K | C | H | Q | H | Y | Y | I | T | T | L | P | G | R | Q | W | P | K | I | E | A | F | I | I | W | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
| . |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
| . |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |
|
|   |
|
|
Template Sequence |   |
Q | E | R | I | V | E | A | N | S | V | G | Q | A | H | S | Q | T | A | S | G | A | A | D | L | G | F | V | A | L | A | Q | I | I | Q | A | A | A | K | I | P | G | S | H | W | F | P | P | A | N | Y | Y | E | P | I | V | Q | Q | A | V | I | T | K | S | T | A | E | K | A | N | A | E | Q | F | M | S | W | M |
Template Known Secondary structure |   |
T | T |
|  |  |  |  | S | S |  |  |  |  |  |  |  |  |  | T | T | S | S | S |  |  |  |  |  | G | G | G | T |
|
| T | T | S |
|
| S | S |  |  |  |
|
|
| G | G | G | S |
|
|
|  |  |  |  |  |  | B | T | T |
| S |
|  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
138 | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|